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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS08365 and HER17_RS08370 are separated by 262 nucleotides
HER17_RS08370 and HER17_RS08375 are separated by 219 nucleotides
HER17_RS08375 and HER17_RS08380 are separated by 216 nucleotides
HER17_RS08380 and HER17_RS08385 are separated by 353 nucleotides
HER17_RS08365: HER17_RS08365 - phosphate starvation-inducible protein PhoH, at 1,844,099 to 1,844,887
_RS08365
HER17_RS08370: HER17_RS08370 - tRNA-Ser, at 1,845,150 to 1,845,239
_RS08370
HER17_RS08375: HER17_RS08375 - RpiB/LacA/LacB family sugar-phosphate isomerase, at 1,845,459 to 1,846,097
_RS08375
HER17_RS08380: HER17_RS08380 - choline transporter, at 1,846,314 to 1,848,347
_RS08380
HER17_RS08385: HER17_RS08385 - transcriptional regulator BetI, at 1,848,701 to 1,849,288
_RS08385
Group
Condition
HER17
_RS08365
HER17
_RS08370
HER17
_RS08375
HER17
_RS08380
HER17
_RS08385
carbon source
M9+polygalacturonate
+0.0
N.D.
-0.6
-0.1
-0.2
carbon source
M9+polygalacturonate
+0.0
N.D.
-0.6
-0.1
-0.1
carbon source
M9+glucose+arginine
-0.2
N.D.
-0.2
-0.2
-0.1
carbon source
M9+polygalacturonate
+0.2
N.D.
-0.6
+0.1
-0.2
carbon source
M9+glycerol
-0.3
N.D.
-0.0
-0.2
+0.0
plant
Tuber-Atlantic
-0.3
N.D.
+0.1
+0.0
-0.3
carbon source
M9+glycerol
-0.1
N.D.
-0.1
-0.1
-0.2
carbon source
M9+sucrose
-0.1
N.D.
+0.2
-0.0
-0.5
carbon source
M9+glycerol
-0.0
N.D.
-0.2
-0.1
+0.0
carbon source
M9+sucrose
-0.1
N.D.
+0.0
+0.1
-0.3
carbon source
M9+glucose
-0.2
N.D.
-0.1
-0.1
+0.1
carbon source
M9+glucose+arginine
+0.0
N.D.
+0.1
-0.1
-0.2
plant
Tuber-Atlantic
-0.1
N.D.
-0.2
+0.0
+0.2
carbon source
M9+glycerol
-0.2
N.D.
-0.1
-0.2
+0.3
carbon source
M9+starch
-0.1
N.D.
+0.1
+0.0
-0.2
carbon source
M9+glucose+arginine
-0.0
N.D.
+0.3
-0.2
-0.1
carbon source
M9+glucose
+0.0
N.D.
+0.4
-0.3
-0.1
control
LB
+0.1
N.D.
-0.2
+0.0
+0.1
control
LB
+0.1
N.D.
+0.1
-0.0
-0.1
carbon source
M9+glycerol
-0.2
N.D.
+0.3
-0.2
+0.3
carbon source
M9+glycerol
-0.1
N.D.
-0.0
-0.1
+0.4
control
LB
+0.1
N.D.
-0.0
-0.1
+0.1
carbon source
M9+glucose
+0.1
N.D.
+0.1
-0.2
+0.2
carbon source
M9+starch
+0.1
N.D.
+0.2
-0.0
+0.0
control
LB
+0.1
N.D.
+0.1
-0.0
+0.3
control
LB
+0.2
N.D.
+0.1
-0.1
+0.3
control
LB
+0.1
N.D.
-0.1
+0.1
+0.4
plant
Tuber-Atlantic
+0.6
N.D.
-0.0
-0.1
+0.1
carbon source
M9+starch
+0.3
N.D.
+0.1
-0.0
+0.2
plant
Tuber-Atlantic
+0.4
N.D.
-0.3
+0.2
+0.9
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