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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS08105 and HER17_RS08110 are separated by 135 nucleotides
HER17_RS08110 and HER17_RS08115 are separated by 513 nucleotides
HER17_RS08115 and HER17_RS08120 overlap by 1 nucleotides
HER17_RS08120 and HER17_RS08125 are separated by 38 nucleotides
HER17_RS08105: HER17_RS08105 - chemotaxis protein CheW, at 1,792,657 to 1,793,154
_RS08105
HER17_RS08110: HER17_RS08110 - methyl-accepting chemotaxis protein, at 1,793,290 to 1,794,975
_RS08110
HER17_RS08115: HER17_RS08115 - protein-glutamate O-methyltransferase CheR, at 1,795,489 to 1,796,361
_RS08115
HER17_RS08120: HER17_RS08120 - chemotaxis response regulator protein-glutamate methylesterase, at 1,796,361 to 1,797,413
_RS08120
HER17_RS08125: HER17_RS08125 - chemotaxis response regulator CheY, at 1,797,452 to 1,797,841
_RS08125
Group
Condition
HER17
_RS08105
HER17
_RS08110
HER17
_RS08115
HER17
_RS08120
HER17
_RS08125
plant
Tuber-Atlantic
-2.1
-0.4
-2.0
-1.6
-2.3
plant
Tuber-Atlantic
-2.1
-0.4
-2.2
-1.4
-1.6
plant
Tuber-Atlantic
-1.5
-0.1
-1.2
-1.2
-1.3
plant
Tuber-Atlantic
+0.1
-0.5
-0.3
-1.2
-0.0
carbon source
M9+glycerol
-0.2
-0.2
-0.1
+0.1
-0.3
control
LB
-0.1
-0.2
-0.2
+0.2
-0.3
carbon source
M9+glycerol
-0.1
-0.2
-0.1
+0.2
-0.3
control
LB
-0.1
-0.1
-0.3
+0.2
-0.2
carbon source
M9+glycerol
-0.5
+0.0
-0.1
+0.2
-0.2
control
LB
-0.3
-0.0
-0.2
+0.2
-0.1
carbon source
M9+glucose
-0.2
+0.0
+0.2
-0.1
-0.2
carbon source
M9+glycerol
+0.0
-0.1
-0.1
+0.1
-0.3
control
LB
+0.0
-0.1
-0.1
+0.1
-0.2
carbon source
M9+glycerol
-0.2
-0.1
+0.0
+0.1
+0.0
control
LB
-0.1
+0.1
-0.1
+0.3
-0.3
control
LB
-0.0
+0.1
-0.2
+0.2
-0.0
carbon source
M9+glycerol
-0.1
+0.1
+0.1
+0.2
-0.2
carbon source
M9+glucose
-0.1
+0.0
+0.1
-0.0
+0.2
carbon source
M9+starch
-0.0
+0.0
+0.2
+0.2
+0.0
carbon source
M9+polygalacturonate
-0.0
-0.2
+0.1
+0.0
+0.5
carbon source
M9+glucose+arginine
-0.1
+0.0
+0.2
+0.1
+0.2
carbon source
M9+starch
-0.1
+0.0
+0.1
+0.1
+0.4
carbon source
M9+polygalacturonate
+0.1
+0.1
+0.1
+0.0
+0.2
carbon source
M9+polygalacturonate
+0.2
+0.2
+0.1
+0.1
+0.1
carbon source
M9+glucose+arginine
+0.2
-0.1
+0.2
+0.1
+0.4
carbon source
M9+glucose
+0.3
-0.1
+0.2
+0.0
+0.4
carbon source
M9+sucrose
+0.1
-0.1
+0.3
+0.1
+0.3
carbon source
M9+sucrose
+0.2
-0.1
+0.3
+0.1
+0.4
carbon source
M9+sucrose
+0.5
-0.1
+0.3
+0.2
+0.1
carbon source
M9+glucose+arginine
+0.3
+0.2
+0.4
-0.0
+0.4
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