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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS08085 and HER17_RS08090 are separated by 134 nucleotides
HER17_RS08090 and HER17_RS08095 overlap by 4 nucleotides
HER17_RS08095 and HER17_RS08100 are separated by 39 nucleotides
HER17_RS08100 and HER17_RS08105 are separated by 31 nucleotides
HER17_RS08085: HER17_RS08085 - flagellar transcriptional regulator FlhC, at 1,787,930 to 1,788,508
_RS08085
HER17_RS08090: HER17_RS08090 - flagellar motor stator protein MotA, at 1,788,643 to 1,789,530
_RS08090
HER17_RS08095: HER17_RS08095 - flagellar motor protein MotB, at 1,789,527 to 1,790,582
_RS08095
HER17_RS08100: HER17_RS08100 - chemotaxis protein CheA, at 1,790,622 to 1,792,625
_RS08100
HER17_RS08105: HER17_RS08105 - chemotaxis protein CheW, at 1,792,657 to 1,793,154
_RS08105
Group
Condition
HER17
_RS08085
HER17
_RS08090
HER17
_RS08095
HER17
_RS08100
HER17
_RS08105
plant
Tuber-Atlantic
+0.9
-0.8
-0.9
-2.1
-2.1
plant
Tuber-Atlantic
+2.0
-0.2
-0.0
-1.7
-2.1
control
LB
-0.2
-0.5
-0.4
-0.2
-0.1
control
LB
-0.1
-0.5
-0.4
-0.2
-0.1
control
LB
-0.1
-0.4
-0.3
-0.2
-0.1
control
LB
+0.1
-0.3
-0.3
-0.1
-0.3
carbon source
M9+glycerol
+0.6
-0.5
-0.3
-0.3
-0.2
plant
Tuber-Atlantic
+1.6
+0.3
+0.3
-1.5
-1.5
control
LB
-0.0
-0.3
-0.2
-0.1
-0.0
carbon source
M9+glycerol
+0.3
+0.0
+0.1
-0.4
-0.5
control
LB
+0.2
-0.1
-0.2
-0.3
+0.0
carbon source
M9+glycerol
+0.3
+0.2
+0.2
-0.4
-0.2
carbon source
M9+polygalacturonate
+1.0
-0.4
-0.4
+0.0
-0.0
carbon source
M9+glycerol
+0.4
+0.2
+0.2
-0.2
-0.1
carbon source
M9+polygalacturonate
+1.2
-0.4
-0.1
+0.1
+0.1
carbon source
M9+starch
+0.6
+0.3
+0.2
-0.0
-0.0
carbon source
M9+starch
+0.9
+0.2
+0.2
-0.1
-0.1
carbon source
M9+glycerol
+0.6
+0.4
+0.5
-0.2
-0.1
carbon source
M9+starch
+0.8
+0.3
+0.3
-0.0
-0.0
carbon source
M9+polygalacturonate
+1.3
-0.0
+0.2
+0.0
+0.2
carbon source
M9+glucose
+1.4
+0.8
+0.6
+0.1
-0.2
carbon source
M9+sucrose
+0.8
+1.0
+0.8
+0.3
+0.1
carbon source
M9+glucose
+1.6
+0.9
+0.6
+0.1
-0.1
carbon source
M9+glucose
+1.7
+0.7
+0.5
+0.2
+0.3
carbon source
M9+sucrose
+1.1
+1.0
+0.9
+0.3
+0.2
carbon source
M9+sucrose
+1.0
+1.0
+0.9
+0.3
+0.5
carbon source
M9+glucose+arginine
+1.8
+0.9
+1.0
+0.2
-0.1
carbon source
M9+glucose+arginine
+1.7
+1.0
+1.0
+0.2
+0.2
carbon source
M9+glucose+arginine
+1.5
+1.2
+1.1
+0.2
+0.3
plant
Tuber-Atlantic
+1.9
+4.4
+4.1
-0.2
+0.1
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