Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS07555 and HER17_RS07560 are separated by 122 nucleotidesHER17_RS07560 and HER17_RS07565 are separated by 282 nucleotidesHER17_RS07565 and HER17_RS07570 are separated by 1 nucleotidesHER17_RS07570 and HER17_RS07575 overlap by 1 nucleotides HER17_RS07555: HER17_RS07555 - DUF6387 family protein, at 1,680,290 to 1,681,144 _RS07555 HER17_RS07560: HER17_RS07560 - AlpA family phage regulatory protein, at 1,681,267 to 1,681,425 _RS07560 HER17_RS07565: HER17_RS07565 - site-specific integrase, at 1,681,708 to 1,682,913 _RS07565 HER17_RS07570: HER17_RS07570 - site-specific integrase, at 1,682,915 to 1,684,225 _RS07570 HER17_RS07575: HER17_RS07575 - DNA-binding protein, at 1,684,225 to 1,685,853 _RS07575
Group Condition HER17_RS07555 HER17_RS07560 HER17_RS07565 HER17_RS07570 HER17_RS07575
carbon source M9+glucose+arginine -0.0 N.D. -0.2 -0.6 +0.1
carbon source M9+glycerol -0.2 N.D. -0.0 -0.1 -0.3
carbon source M9+starch -0.0 N.D. -0.1 -0.2 -0.3
carbon source M9+glucose+arginine +0.0 N.D. -0.1 -0.4 -0.1
carbon source M9+glucose -0.2 N.D. +0.4 -0.1 -0.4
control LB -0.1 N.D. -0.2 +0.4 -0.3
carbon source M9+sucrose -0.0 N.D. +0.5 -0.6 -0.0
carbon source M9+starch +0.1 N.D. +0.1 -0.1 -0.1
carbon source M9+sucrose +0.1 N.D. -0.1 -0.0 -0.1
carbon source M9+glycerol +0.0 N.D. -0.3 +0.4 -0.1
carbon source M9+glucose -0.1 N.D. +0.0 -0.2 +0.4
carbon source M9+starch +0.0 N.D. -0.1 +0.1 +0.1
control LB +0.2 N.D. +0.1 -0.1 -0.1
control LB +0.2 N.D. +0.0 +0.3 -0.3
plant Tuber-Atlantic -0.4 N.D. +1.0 -0.7 +0.3
carbon source M9+sucrose +0.2 N.D. +0.2 -0.1 -0.0
control LB +0.1 N.D. +0.3 +0.2 -0.3
carbon source M9+glycerol +0.4 N.D. +0.5 -0.3 -0.1
control LB +0.1 N.D. +0.1 +0.4 -0.1
carbon source M9+glycerol +0.1 N.D. +0.2 +0.4 -0.1
plant Tuber-Atlantic -0.2 N.D. +1.1 -0.4 +0.1
carbon source M9+glycerol -0.0 N.D. +0.3 +0.5 -0.1
carbon source M9+polygalacturonate +0.3 N.D. +0.5 +0.1 -0.1
control LB -0.1 N.D. +0.7 +0.1 +0.2
carbon source M9+glucose+arginine +0.3 N.D. +0.7 -0.4 +0.3
carbon source M9+glycerol +0.1 N.D. +0.5 +0.5 -0.2
carbon source M9+polygalacturonate +0.1 N.D. +0.6 -0.0 +0.2
carbon source M9+glucose +0.0 N.D. +0.6 +0.8 -0.1
plant Tuber-Atlantic -0.5 N.D. +0.8 +1.0 +0.2
plant Tuber-Atlantic -0.4 N.D. +0.9 +1.7 -0.0
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