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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS07040 and HER17_RS07045 are separated by 17 nucleotides
HER17_RS07045 and HER17_RS07050 are separated by 167 nucleotides
HER17_RS07050 and HER17_RS07055 are separated by 15 nucleotides
HER17_RS07055 and HER17_RS07060 are separated by 125 nucleotides
HER17_RS07040: HER17_RS07040 - ABC transporter permease, at 1,560,292 to 1,561,008
_RS07040
HER17_RS07045: HER17_RS07045 - histidine ABC transporter ATP-binding protein HisP, at 1,561,026 to 1,561,799
_RS07045
HER17_RS07050: HER17_RS07050 - TIGR01777 family oxidoreductase, at 1,561,967 to 1,562,872
_RS07050
HER17_RS07055: HER17_RS07055 - dihydroneopterin triphosphate 2'-epimerase, at 1,562,888 to 1,563,259
_RS07055
HER17_RS07060: HER17_RS07060 - GSH-dependent disulfide bond oxidoreductase, at 1,563,385 to 1,564,011
_RS07060
Group
Condition
HER17
_RS07040
HER17
_RS07045
HER17
_RS07050
HER17
_RS07055
HER17
_RS07060
carbon source
M9+glucose
-0.4
-0.1
-0.1
-0.0
+0.1
carbon source
M9+glucose+arginine
-0.1
-0.3
+0.0
-0.0
-0.1
plant
Tuber-Atlantic
-0.1
-0.3
-0.2
+0.2
-0.1
plant
Tuber-Atlantic
+0.0
+0.2
-0.2
-0.4
-0.1
carbon source
M9+glycerol
-0.1
+0.2
-0.1
-0.3
+0.0
carbon source
M9+glycerol
-0.0
-0.0
-0.1
-0.3
+0.0
carbon source
M9+glycerol
+0.1
-0.2
-0.0
-0.1
-0.1
carbon source
M9+sucrose
-0.1
+0.0
-0.0
-0.2
+0.0
carbon source
M9+starch
-0.1
-0.2
+0.2
-0.2
-0.0
carbon source
M9+glucose
-0.3
+0.1
+0.1
-0.3
+0.2
carbon source
M9+glycerol
+0.0
+0.1
-0.1
-0.2
-0.1
control
LB
-0.0
-0.0
+0.1
+0.0
-0.1
carbon source
M9+sucrose
-0.0
-0.2
+0.1
+0.1
-0.0
carbon source
M9+starch
-0.1
-0.1
+0.0
+0.1
-0.0
control
LB
+0.0
-0.1
+0.0
+0.1
+0.0
control
LB
-0.0
-0.1
-0.0
+0.2
+0.0
control
LB
-0.0
+0.2
+0.1
-0.1
-0.0
carbon source
M9+polygalacturonate
-0.1
-0.0
+0.1
+0.1
-0.0
control
LB
-0.0
+0.1
+0.0
+0.0
+0.1
carbon source
M9+sucrose
+0.1
+0.2
-0.0
-0.0
-0.0
plant
Tuber-Atlantic
+0.1
+0.4
-0.2
+0.1
-0.0
carbon source
M9+glycerol
-0.1
+0.3
-0.0
-0.1
+0.2
carbon source
M9+glucose+arginine
-0.3
+0.2
+0.2
+0.1
+0.1
carbon source
M9+starch
-0.0
+0.2
+0.1
+0.1
+0.0
carbon source
M9+glucose+arginine
-0.2
+0.2
+0.0
+0.4
+0.0
carbon source
M9+polygalacturonate
-0.1
+0.0
+0.1
+0.2
+0.2
control
LB
-0.0
+0.1
+0.1
+0.1
+0.1
carbon source
M9+glucose
-0.2
+0.3
+0.1
+0.2
-0.0
carbon source
M9+polygalacturonate
-0.0
+0.1
+0.1
+0.3
+0.2
plant
Tuber-Atlantic
-0.1
+0.5
+0.1
+0.7
+0.1
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