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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS06315 and HER17_RS06320 overlap by 4 nucleotides
HER17_RS06320 and HER17_RS06325 overlap by 1 nucleotides
HER17_RS06325 and HER17_RS06330 are separated by 245 nucleotides
HER17_RS06330 and HER17_RS06335 are separated by 257 nucleotides
HER17_RS06315: HER17_RS06315 - multidrug efflux RND transporter permease subunit MdtC, at 1,398,638 to 1,401,718
_RS06315
HER17_RS06320: HER17_RS06320 - MdtB/MuxB family multidrug efflux RND transporter permease subunit, at 1,401,715 to 1,404,837
_RS06320
HER17_RS06325: HER17_RS06325 - MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit, at 1,404,837 to 1,406,072
_RS06325
HER17_RS06330: HER17_RS06330 - NupC/NupG family nucleoside CNT transporter, at 1,406,318 to 1,407,514
_RS06330
HER17_RS06335: HER17_RS06335 - aldo/keto reductase, at 1,407,772 to 1,408,737
_RS06335
Group
Condition
HER17
_RS06315
HER17
_RS06320
HER17
_RS06325
HER17
_RS06330
HER17
_RS06335
carbon source
M9+glucose+arginine
-0.2
-0.3
-0.1
-0.2
-0.1
carbon source
M9+glucose
-0.1
-0.0
-0.3
-0.2
-0.3
carbon source
M9+glucose+arginine
-0.1
-0.1
-0.2
-0.2
+0.0
carbon source
M9+glucose
-0.1
-0.1
-0.3
-0.2
+0.1
carbon source
M9+starch
-0.1
-0.1
-0.2
-0.2
-0.1
carbon source
M9+sucrose
-0.3
-0.0
-0.1
+0.1
-0.2
carbon source
M9+polygalacturonate
-0.1
-0.1
-0.2
-0.0
-0.1
carbon source
M9+polygalacturonate
-0.1
+0.0
-0.0
-0.3
-0.1
carbon source
M9+glucose+arginine
+0.0
-0.0
-0.2
-0.1
-0.1
carbon source
M9+polygalacturonate
-0.1
-0.1
-0.1
-0.1
-0.0
carbon source
M9+starch
-0.2
-0.0
-0.1
+0.0
-0.0
carbon source
M9+sucrose
-0.1
+0.1
-0.1
-0.1
-0.0
carbon source
M9+starch
-0.1
+0.0
-0.2
-0.1
+0.1
carbon source
M9+sucrose
-0.1
-0.1
+0.1
-0.1
-0.0
control
LB
-0.0
+0.0
+0.0
-0.1
-0.0
carbon source
M9+glycerol
-0.2
+0.1
+0.0
+0.0
+0.0
carbon source
M9+glucose
+0.1
+0.0
-0.1
-0.1
-0.0
carbon source
M9+glycerol
-0.1
+0.1
-0.3
+0.0
+0.2
control
LB
+0.0
+0.1
+0.0
-0.2
+0.1
carbon source
M9+glycerol
+0.0
+0.0
-0.1
+0.0
+0.1
carbon source
M9+glycerol
-0.0
+0.0
+0.1
+0.0
+0.1
control
LB
+0.0
+0.1
+0.1
-0.0
+0.0
control
LB
+0.1
+0.1
-0.0
-0.1
+0.2
control
LB
+0.0
+0.0
+0.1
-0.0
+0.1
carbon source
M9+glycerol
+0.1
+0.1
-0.1
+0.2
+0.1
control
LB
+0.1
+0.1
+0.0
+0.0
+0.1
plant
Tuber-Atlantic
+0.1
+0.2
-0.2
+0.5
+0.1
plant
Tuber-Atlantic
+0.1
-0.0
+0.2
+0.4
+0.0
plant
Tuber-Atlantic
+0.2
+0.2
+0.4
+0.2
+0.0
plant
Tuber-Atlantic
+0.2
-0.1
+0.8
+0.3
+0.3
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HER17_RS06325
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