Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS05905 and HER17_RS05910 are separated by 216 nucleotidesHER17_RS05910 and HER17_RS05915 are separated by 721 nucleotidesHER17_RS05915 and HER17_RS05920 are separated by 18 nucleotidesHER17_RS05920 and HER17_RS05925 overlap by 4 nucleotides HER17_RS05905: HER17_RS05905 - membrane-bound lytic murein transglycosylase MltF, at 1,307,357 to 1,308,865 _RS05905 HER17_RS05910: HER17_RS05910 - phosphoribosylformylglycinamidine synthase, at 1,309,082 to 1,312,969 _RS05910 HER17_RS05915: HER17_RS05915 - HAMP domain-containing histidine kinase, at 1,313,691 to 1,315,127 _RS05915 HER17_RS05920: HER17_RS05920 - two-component system QseEF-associated lipoprotein QseG, at 1,315,146 to 1,315,997 _RS05920 HER17_RS05925: HER17_RS05925 - two-component system response regulator GlrR, at 1,315,994 to 1,317,331 _RS05925
Group Condition HER17_RS05905 HER17_RS05910 HER17_RS05915 HER17_RS05920 HER17_RS05925
carbon source M9+polygalacturonate +0.1 -5.1 +0.1 +0.3 +0.3
carbon source M9+glycerol -0.1 -3.6 -0.1 -0.1 -0.2
carbon source M9+polygalacturonate +0.0 -4.9 +0.3 +0.2 +0.4
carbon source M9+glycerol -0.1 -3.9 +0.0 +0.1 +0.0
carbon source M9+polygalacturonate +0.1 -4.8 +0.3 +0.1 +0.4
carbon source M9+glycerol +0.1 -4.0 -0.0 +0.2 -0.1
carbon source M9+glycerol +0.1 -3.9 +0.1 +0.1 +0.1
carbon source M9+glycerol +0.0 -3.6 +0.0 +0.1 -0.0
carbon source M9+glycerol +0.1 -3.6 +0.2 +0.3 -0.0
carbon source M9+sucrose -0.0 -4.1 +0.4 +0.3 +0.3
carbon source M9+sucrose +0.1 -3.9 +0.1 +0.3 +0.5
carbon source M9+starch +0.0 -3.0 +0.1 +0.2 +0.2
carbon source M9+sucrose +0.2 -3.8 +0.3 +0.4 +0.4
carbon source M9+starch +0.2 -3.0 +0.1 +0.2 +0.2
carbon source M9+starch +0.1 -3.0 +0.1 +0.2 +0.3
plant Tuber-Atlantic +0.2 -1.0 -0.4 -0.1 -0.4
carbon source M9+glucose+arginine -0.2 -3.3 +0.9 +0.7 +0.8
control LB -0.0 +0.1 -0.3 -0.4 -0.5
carbon source M9+glucose -0.4 -3.3 +0.9 +0.9 +0.8
plant Tuber-Atlantic +0.1 -1.0 -0.0 +0.1 -0.3
control LB +0.0 -0.0 -0.3 -0.4 -0.4
plant Tuber-Atlantic -0.3 -0.5 -0.1 -0.1 -0.1
carbon source M9+glucose+arginine -0.2 -3.3 +0.9 +0.9 +0.9
control LB +0.1 +0.1 -0.3 -0.3 -0.4
plant Tuber-Atlantic -0.3 -0.8 +0.3 -0.0 +0.0
control LB -0.1 +0.0 -0.2 -0.3 -0.1
carbon source M9+glucose -0.3 -3.3 +1.1 +1.0 +0.9
carbon source M9+glucose+arginine -0.2 -3.3 +1.0 +0.8 +1.1
carbon source M9+glucose -0.3 -3.3 +1.0 +1.0 +1.2
control LB -0.1 +0.1 -0.2 -0.1 -0.1
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