Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS05830 and HER17_RS05835 overlap by 1 nucleotidesHER17_RS05835 and HER17_RS05840 are separated by 18 nucleotidesHER17_RS05840 and HER17_RS05845 are separated by 470 nucleotidesHER17_RS05845 and HER17_RS05850 are separated by 787 nucleotides HER17_RS05830: HER17_RS05830 - pyridoxine 5'-phosphate synthase, at 1,278,128 to 1,278,859 _RS05830 HER17_RS05835: HER17_RS05835 - holo-ACP synthase, at 1,278,859 to 1,279,239 _RS05835 HER17_RS05840: HER17_RS05840 - YfhL family 4Fe-4S dicluster ferredoxin, at 1,279,258 to 1,279,518 _RS05840 HER17_RS05845: HER17_RS05845 - cyclic-guanylate-specific phosphodiesterase, at 1,279,989 to 1,280,780 _RS05845 HER17_RS05850: HER17_RS05850 - sensor domain-containing diguanylate cyclase, at 1,281,568 to 1,283,082 _RS05850
Group Condition HER17_RS05830 HER17_RS05835 HER17_RS05840 HER17_RS05845 HER17_RS05850
carbon source M9+polygalacturonate -3.8 N.D. +0.0 -0.3 -1.1
carbon source M9+polygalacturonate -4.0 N.D. -0.0 +0.2 -1.0
carbon source M9+polygalacturonate -3.7 N.D. -0.0 -0.0 -1.0
carbon source M9+glycerol -3.8 N.D. -0.3 -0.4 +0.1
carbon source M9+starch -3.5 N.D. -0.3 -0.1 -0.5
carbon source M9+starch -4.0 N.D. +0.2 +0.1 -0.4
carbon source M9+glucose -3.5 N.D. -0.2 +0.3 -0.6
carbon source M9+glycerol -3.9 N.D. -0.1 -0.0 +0.1
carbon source M9+glucose -3.7 N.D. -0.1 +0.5 -0.5
carbon source M9+sucrose -3.5 N.D. -0.3 +0.5 -0.5
carbon source M9+starch -3.2 N.D. -0.1 +0.1 -0.4
carbon source M9+glycerol -3.3 N.D. -0.1 -0.3 +0.1
carbon source M9+glucose+arginine -3.2 N.D. -0.1 +0.5 -0.7
carbon source M9+glucose+arginine -3.4 N.D. -0.1 +0.8 -0.6
carbon source M9+glucose -2.9 N.D. -0.2 +0.6 -0.7
carbon source M9+glycerol -2.6 N.D. -0.4 -0.2 +0.1
carbon source M9+glycerol -2.8 N.D. -0.1 -0.2 +0.1
carbon source M9+glucose+arginine -2.9 N.D. -0.1 +0.5 -0.5
carbon source M9+sucrose -2.7 N.D. -0.0 +0.6 -0.6
carbon source M9+glycerol -2.6 N.D. -0.2 -0.0 +0.0
carbon source M9+sucrose -2.1 N.D. -0.0 +0.4 -0.4
plant Tuber-Atlantic -0.4 N.D. -1.5 -0.4 +0.5
control LB -1.0 N.D. +0.0 -0.3 -0.2
control LB -1.0 N.D. -0.3 -0.2 -0.0
control LB -0.7 N.D. -0.3 -0.2 -0.2
plant Tuber-Atlantic +0.6 N.D. -1.3 -0.5 +0.0
control LB -0.7 N.D. -0.0 +0.0 -0.2
control LB +0.3 N.D. -0.1 -0.4 -0.1
plant Tuber-Atlantic +0.1 N.D. -0.5 -0.1 +1.0
plant Tuber-Atlantic +0.6 N.D. -1.1 +1.5 +0.0
remove
HER17_RS05830
plot		 remove
HER17_RS05835
plot		 remove
HER17_RS05840		 remove
HER17_RS05845
plot		 remove
HER17_RS05850
plot