Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS05605 and HER17_RS05610 are separated by 16 nucleotidesHER17_RS05610 and HER17_RS05615 overlap by 8 nucleotidesHER17_RS05615 and HER17_RS05620 are separated by 42 nucleotidesHER17_RS05620 and HER17_RS05625 are separated by 136 nucleotides HER17_RS05605: HER17_RS05605 - Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC, at 1,236,218 to 1,237,015 _RS05605 HER17_RS05610: HER17_RS05610 - Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD, at 1,237,032 to 1,237,958 _RS05610 HER17_RS05615: HER17_RS05615 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 1,237,951 to 1,239,969 _RS05615 HER17_RS05620: HER17_RS05620 - LysE family translocator, at 1,240,012 to 1,240,602 _RS05620 HER17_RS05625: HER17_RS05625 - PLP-dependent aminotransferase family protein, at 1,240,739 to 1,242,199 _RS05625
Group Condition HER17_RS05605 HER17_RS05610 HER17_RS05615 HER17_RS05620 HER17_RS05625
control LB -0.4 +0.0 -0.1 -0.1 +0.1
plant Tuber-Atlantic -0.1 -0.1 -0.1 +0.1 -0.2
carbon source M9+glycerol -0.4 -0.1 -0.0 +0.0 +0.1
plant Tuber-Atlantic -0.2 -0.1 -0.0 +0.3 -0.3
carbon source M9+glycerol -0.1 -0.0 -0.0 -0.0 -0.1
control LB -0.3 +0.2 -0.1 +0.1 -0.1
control LB -0.2 -0.0 +0.1 -0.1 +0.1
control LB -0.2 -0.1 -0.0 +0.1 +0.1
carbon source M9+glycerol -0.4 +0.0 -0.1 +0.2 +0.2
carbon source M9+glycerol -0.2 +0.1 -0.1 +0.1 -0.0
carbon source M9+glycerol -0.3 +0.1 -0.0 +0.1 +0.2
carbon source M9+glucose +0.4 +0.0 -0.2 +0.1 -0.2
control LB -0.1 -0.1 +0.0 +0.1 +0.2
carbon source M9+glucose+arginine +0.1 +0.0 -0.2 +0.1 +0.1
carbon source M9+starch +0.2 +0.1 -0.1 -0.0 +0.1
carbon source M9+polygalacturonate +0.2 +0.1 -0.0 -0.0 -0.0
carbon source M9+sucrose +0.1 +0.1 -0.1 +0.1 +0.0
carbon source M9+sucrose +0.2 +0.1 +0.0 +0.1 -0.1
carbon source M9+glucose +0.2 +0.1 +0.2 +0.0 -0.1
carbon source M9+glycerol -0.1 +0.1 +0.1 +0.2 +0.0
plant Tuber-Atlantic +0.2 -0.1 -0.3 +0.1 +0.6
carbon source M9+glucose +0.2 +0.4 -0.1 +0.0 -0.1
carbon source M9+sucrose +0.3 +0.1 +0.1 -0.0 +0.1
carbon source M9+starch +0.2 +0.2 +0.0 +0.2 -0.0
carbon source M9+starch +0.3 +0.1 +0.1 +0.2 -0.1
carbon source M9+polygalacturonate +0.1 +0.1 +0.0 +0.2 +0.2
plant Tuber-Atlantic +0.1 +0.1 +0.1 +0.5 -0.1
carbon source M9+polygalacturonate +0.4 +0.1 +0.0 +0.1 +0.2
carbon source M9+glucose+arginine +0.3 +0.2 +0.1 +0.3 +0.0
carbon source M9+glucose+arginine +0.4 +0.3 +0.1 +0.4 +0.2
remove
HER17_RS05605
plot		 remove
HER17_RS05610
plot		 remove
HER17_RS05615		 remove
HER17_RS05620
plot		 remove
HER17_RS05625
plot