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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS05495 and HER17_RS05500 are separated by 516 nucleotides
HER17_RS05500 and HER17_RS05505 are separated by 45 nucleotides
HER17_RS05505 and HER17_RS05510 are separated by 108 nucleotides
HER17_RS05510 and HER17_RS05515 are separated by 466 nucleotides
HER17_RS05495: HER17_RS05495 - glutaredoxin-like protein NrdH, at 1,213,066 to 1,213,305
_RS05495
HER17_RS05500: HER17_RS05500 - adenosylmethionine decarboxylase, at 1,213,822 to 1,214,616
_RS05500
HER17_RS05505: HER17_RS05505 - polyamine aminopropyltransferase, at 1,214,662 to 1,215,525
_RS05505
HER17_RS05510: HER17_RS05510 - YacC family pilotin-like protein, at 1,215,634 to 1,215,981
_RS05510
HER17_RS05515: HER17_RS05515 - iron ABC transporter permease, at 1,216,448 to 1,218,022
_RS05515
Group
Condition
HER17
_RS05495
HER17
_RS05500
HER17
_RS05505
HER17
_RS05510
HER17
_RS05515
carbon source
M9+glycerol
-0.2
-0.2
-0.0
-0.6
-0.1
carbon source
M9+starch
-0.2
-0.1
-0.1
-0.5
+0.0
carbon source
M9+sucrose
-0.2
+0.1
+0.0
-0.5
-0.1
carbon source
M9+glycerol
-0.1
-0.2
-0.1
-0.2
-0.1
carbon source
M9+glycerol
-0.1
-0.1
+0.1
-0.3
+0.1
carbon source
M9+polygalacturonate
-0.1
-0.0
-0.2
-0.1
-0.0
control
LB
-0.0
-0.1
-0.0
-0.2
+0.0
carbon source
M9+sucrose
+0.0
-0.0
+0.1
-0.4
-0.0
carbon source
M9+glycerol
-0.2
-0.0
+0.0
-0.1
+0.1
control
LB
-0.1
-0.2
-0.0
-0.1
+0.1
carbon source
M9+sucrose
-0.0
-0.1
+0.1
-0.1
-0.1
carbon source
M9+glycerol
-0.2
-0.0
+0.1
-0.1
+0.1
control
LB
-0.2
+0.0
-0.1
+0.1
-0.1
carbon source
M9+starch
+0.0
+0.1
+0.0
-0.3
-0.0
plant
Tuber-Atlantic
+0.1
-0.2
+0.1
-0.1
-0.0
control
LB
+0.0
+0.0
+0.2
-0.4
+0.1
carbon source
M9+starch
-0.2
+0.2
-0.0
-0.1
+0.0
carbon source
M9+polygalacturonate
-0.0
+0.2
-0.1
-0.2
-0.1
control
LB
+0.1
-0.1
-0.0
-0.1
-0.0
control
LB
+0.1
-0.0
-0.0
-0.0
+0.1
plant
Tuber-Atlantic
-0.2
+0.2
+0.3
-0.4
+0.1
carbon source
M9+glucose+arginine
-0.1
+0.1
-0.2
+0.3
+0.0
carbon source
M9+glucose
-0.0
-0.1
+0.0
+0.4
+0.1
carbon source
M9+glucose
-0.1
+0.4
+0.3
-0.2
+0.1
carbon source
M9+glycerol
-0.0
-0.0
-0.0
+0.5
+0.1
carbon source
M9+glucose+arginine
+0.1
-0.2
+0.1
+0.6
-0.0
carbon source
M9+glucose
+0.2
+0.0
+0.1
+0.3
-0.0
plant
Tuber-Atlantic
+0.5
-0.1
+0.2
+0.0
+0.1
carbon source
M9+glucose+arginine
+0.1
+0.3
-0.1
+0.3
+0.0
plant
Tuber-Atlantic
+0.3
+0.1
+0.1
+0.5
+0.1
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