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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS04995 and HER17_RS05000 are separated by 105 nucleotides
HER17_RS05000 and HER17_RS05005 are separated by 288 nucleotides
HER17_RS05005 and HER17_RS05010 are separated by 215 nucleotides
HER17_RS05010 and HER17_RS05015 are separated by 121 nucleotides
HER17_RS04995: HER17_RS04995 - hypothetical protein, at 1,130,173 to 1,130,322
_RS04995
HER17_RS05000: HER17_RS05000 - bacteriocin immunity protein, at 1,130,428 to 1,130,850
_RS05000
HER17_RS05005: HER17_RS05005 - glutaredoxin 2, at 1,131,139 to 1,131,774
_RS05005
HER17_RS05010: HER17_RS05010 - LysR family transcriptional regulator, at 1,131,990 to 1,132,871
_RS05010
HER17_RS05015: HER17_RS05015 - MFS transporter, at 1,132,993 to 1,134,183
_RS05015
Group
Condition
HER17
_RS04995
HER17
_RS05000
HER17
_RS05005
HER17
_RS05010
HER17
_RS05015
carbon source
M9+sucrose
+0.0
-0.0
-0.5
-0.1
-0.0
plant
Tuber-Atlantic
-0.2
+0.0
+0.1
-0.6
+0.2
control
LB
-0.1
+0.1
-0.3
-0.2
+0.0
carbon source
M9+glycerol
-0.1
-0.2
-0.2
-0.1
+0.1
plant
Tuber-Atlantic
-0.2
+0.3
-0.3
-0.4
+0.2
carbon source
M9+glycerol
-0.0
+0.2
-0.4
-0.0
+0.1
control
LB
-0.2
-0.1
-0.0
+0.1
+0.0
carbon source
M9+polygalacturonate
-0.1
+0.1
+0.0
-0.2
-0.0
control
LB
-0.2
-0.1
-0.1
+0.1
+0.2
carbon source
M9+glucose+arginine
+0.4
+0.3
-0.6
-0.2
-0.1
carbon source
M9+polygalacturonate
+0.1
-0.0
-0.1
-0.1
+0.0
control
LB
+0.1
-0.0
-0.0
-0.1
+0.1
plant
Tuber-Atlantic
-0.1
+0.4
-0.2
-0.1
+0.1
carbon source
M9+sucrose
+0.1
+0.0
-0.1
+0.1
+0.1
carbon source
M9+sucrose
+0.0
-0.1
-0.0
+0.0
+0.1
carbon source
M9+starch
-0.1
+0.2
+0.0
-0.0
-0.0
plant
Tuber-Atlantic
-0.1
+0.1
+0.1
-0.0
+0.2
carbon source
M9+glycerol
-0.1
+0.1
+0.0
+0.2
+0.1
carbon source
M9+glucose
+0.0
+0.1
+0.0
+0.1
+0.0
carbon source
M9+polygalacturonate
+0.1
+0.1
+0.2
-0.1
+0.1
carbon source
M9+starch
+0.2
-0.0
+0.1
+0.0
+0.1
carbon source
M9+glycerol
+0.1
-0.2
+0.1
+0.1
+0.2
carbon source
M9+glycerol
+0.1
+0.1
-0.1
+0.1
+0.2
control
LB
+0.0
+0.1
+0.1
+0.1
+0.0
carbon source
M9+glucose
+0.3
+0.2
+0.0
-0.3
+0.2
control
LB
-0.1
+0.2
-0.0
+0.4
+0.0
carbon source
M9+glucose
+0.3
+0.3
-0.4
+0.2
+0.2
carbon source
M9+starch
+0.1
+0.1
+0.1
+0.1
+0.1
carbon source
M9+glucose+arginine
+0.0
+0.3
+0.2
+0.2
-0.0
carbon source
M9+glucose+arginine
+0.3
+0.3
-0.0
+0.4
+0.0
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