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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS04660 and HER17_RS04665 are separated by 231 nucleotides
HER17_RS04665 and HER17_RS04670 are separated by 75 nucleotides
HER17_RS04670 and HER17_RS04675 are separated by 66 nucleotides
HER17_RS04675 and HER17_RS04680 are separated by 331 nucleotides
HER17_RS04660: HER17_RS04660 - SAM-dependent methyltransferase, at 1,057,191 to 1,057,961
_RS04660
HER17_RS04665: HER17_RS04665 - helix-turn-helix transcriptional regulator, at 1,058,193 to 1,058,993
_RS04665
HER17_RS04670: HER17_RS04670 - DNA polymerase IV, at 1,059,069 to 1,060,127
_RS04670
HER17_RS04675: HER17_RS04675 - beta-Ala-His dipeptidase, at 1,060,194 to 1,061,654
_RS04675
HER17_RS04680: HER17_RS04680 - xanthine phosphoribosyltransferase, at 1,061,986 to 1,062,444
_RS04680
Group
Condition
HER17
_RS04660
HER17
_RS04665
HER17
_RS04670
HER17
_RS04675
HER17
_RS04680
carbon source
M9+glucose+arginine
+0.0
-0.2
-0.2
-0.9
-0.6
carbon source
M9+glucose+arginine
-0.0
-0.3
+0.1
-1.4
-0.1
carbon source
M9+glucose
-0.3
-0.2
-0.0
-1.2
+0.2
plant
Tuber-Atlantic
+0.3
-0.3
-0.0
-1.1
-0.3
carbon source
M9+glucose
+0.4
+0.1
-0.0
-1.5
-0.1
carbon source
M9+starch
+0.0
-0.1
-0.1
-0.3
-0.6
carbon source
M9+sucrose
-0.1
+0.1
-0.0
-0.1
-0.7
carbon source
M9+glucose+arginine
-0.3
+0.2
+0.1
-0.7
-0.2
carbon source
M9+glucose
+0.0
+0.2
+0.2
-1.2
-0.1
control
LB
+0.0
-0.1
-0.0
-0.3
-0.3
control
LB
-0.1
-0.1
+0.0
-0.3
-0.1
carbon source
M9+sucrose
-0.1
+0.1
+0.0
-0.1
-0.5
carbon source
M9+sucrose
-0.0
-0.1
-0.1
-0.1
-0.2
carbon source
M9+polygalacturonate
+0.0
+0.1
-0.1
-0.1
-0.5
carbon source
M9+polygalacturonate
-0.1
+0.0
+0.0
-0.1
-0.3
control
LB
+0.1
+0.0
-0.1
-0.1
-0.3
plant
Tuber-Atlantic
+0.2
-0.4
+0.2
-0.4
+0.0
carbon source
M9+glycerol
+0.0
-0.0
-0.0
-0.1
-0.2
carbon source
M9+glycerol
+0.1
-0.2
+0.0
+0.0
-0.3
carbon source
M9+glycerol
+0.0
+0.0
-0.0
+0.0
-0.4
plant
Tuber-Atlantic
+0.1
-0.2
+0.0
-0.2
-0.0
control
LB
+0.1
+0.0
-0.0
-0.2
-0.2
carbon source
M9+starch
+0.1
+0.0
+0.1
-0.2
-0.2
control
LB
+0.1
-0.0
-0.0
-0.1
-0.0
carbon source
M9+glycerol
+0.0
-0.0
-0.1
+0.2
-0.2
carbon source
M9+glycerol
-0.0
-0.0
+0.1
+0.2
-0.2
carbon source
M9+starch
-0.0
+0.0
+0.0
-0.1
+0.2
control
LB
+0.2
+0.1
+0.0
-0.1
-0.1
carbon source
M9+glycerol
+0.0
-0.1
-0.0
+0.2
+0.1
plant
Tuber-Atlantic
-0.0
+0.0
+0.1
+1.0
+0.5
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