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Gene
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Nearby
Cofit
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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500 nt
HER17_RS04385 and HER17_RS04390 are separated by 382 nucleotides
HER17_RS04390 and HER17_RS04395 are separated by 142 nucleotides
HER17_RS04395 and HER17_RS04400 are separated by 239 nucleotides
HER17_RS04400 and HER17_RS04405 are separated by 130 nucleotides
HER17_RS04385: HER17_RS04385 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 998,426 to 998,989
_RS04385
HER17_RS04390: HER17_RS04390 - 16S ribosomal RNA, at 999,372 to 1,000,917
_RS04390
HER17_RS04395: HER17_RS04395 - tRNA-Glu, at 1,001,060 to 1,001,132
_RS04395
HER17_RS04400: HER17_RS04400 - 23S ribosomal RNA, at 1,001,372 to 1,004,285
_RS04400
HER17_RS04405: HER17_RS04405 - 5S ribosomal RNA, at 1,004,416 to 1,004,531
_RS04405
Group
Condition
HER17
_RS04385
HER17
_RS04390
HER17
_RS04395
HER17
_RS04400
HER17
_RS04405
carbon source
M9+sucrose
-2.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-2.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-2.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-2.0
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.8
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.5
N.D.
N.D.
N.D.
N.D.
control
LB
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-1.3
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-1.1
N.D.
N.D.
N.D.
N.D.
control
LB
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-1.1
N.D.
N.D.
N.D.
N.D.
control
LB
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.1
N.D.
N.D.
N.D.
N.D.
control
LB
-1.0
N.D.
N.D.
N.D.
N.D.
control
LB
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-0.9
N.D.
N.D.
N.D.
N.D.
control
LB
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
+0.3
N.D.
N.D.
N.D.
N.D.
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