Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS02945 and HER17_RS02950 are separated by 40 nucleotidesHER17_RS02950 and HER17_RS02955 are separated by 2 nucleotidesHER17_RS02955 and HER17_RS02960 are separated by 12 nucleotidesHER17_RS02960 and HER17_RS02965 overlap by 8 nucleotides HER17_RS02945: HER17_RS02945 - hypothetical protein, at 661,232 to 661,426 _RS02945 HER17_RS02950: HER17_RS02950 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH, at 661,467 to 662,324 _RS02950 HER17_RS02955: HER17_RS02955 - Co2+/Mg2+ efflux protein ApaG, at 662,327 to 662,704 _RS02955 HER17_RS02960: HER17_RS02960 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 662,717 to 663,535 _RS02960 HER17_RS02965: HER17_RS02965 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 663,528 to 664,529 _RS02965
Group Condition HER17_RS02945 HER17_RS02950 HER17_RS02955 HER17_RS02960 HER17_RS02965
carbon source M9+glucose+arginine -0.1 -2.7 -0.4 -2.4 -3.6
carbon source M9+glucose -0.8 -1.8 -0.2 -1.9 -3.7
carbon source M9+glucose +0.1 -1.9 -1.2 -1.6 -3.5
carbon source M9+glucose+arginine +0.3 -2.1 -0.2 -2.2 -3.6
carbon source M9+sucrose -0.5 -1.6 -0.9 -1.8 -3.1
carbon source M9+glycerol -0.0 -2.5 -0.7 -1.1 -3.4
carbon source M9+glycerol +0.3 -2.4 -1.1 -1.9 -2.5
carbon source M9+polygalacturonate -0.1 -0.8 -0.3 -2.0 -3.8
carbon source M9+glucose -0.1 -1.5 -0.0 -2.5 -2.7
carbon source M9+glycerol -0.1 -2.6 -0.7 -0.2 -3.1
carbon source M9+sucrose -0.1 -1.3 -1.1 -1.1 -3.2
carbon source M9+glucose+arginine +0.5 -1.9 -0.4 -2.1 -2.8
carbon source M9+glycerol -0.1 -2.4 -0.5 -1.4 -2.0
carbon source M9+glycerol +0.1 -3.1 -0.5 +0.3 -2.7
carbon source M9+sucrose +0.4 -1.3 -0.5 -0.6 -3.8
carbon source M9+glycerol -0.2 -2.7 -0.6 +0.1 -2.5
carbon source M9+polygalacturonate +0.1 -0.8 -0.3 -0.9 -3.5
carbon source M9+polygalacturonate -0.2 -0.5 +0.1 -0.4 -4.0
carbon source M9+starch -0.2 -0.3 -0.3 -1.2 -2.8
plant Tuber-Atlantic -0.1 -2.2 -0.7 -0.4 -1.0
carbon source M9+starch +0.0 -0.5 -0.1 -1.3 -2.4
plant Tuber-Atlantic -0.0 -1.3 -0.7 -1.5 -0.5
plant Tuber-Atlantic +0.1 -1.6 -0.0 -1.8 -0.4
carbon source M9+starch -0.1 -0.6 -0.1 -0.4 -1.7
control LB -0.2 -0.1 -0.0 -2.3 -0.1
control LB +0.1 -0.0 +0.1 -2.0 -0.3
control LB -0.3 -0.2 -0.0 -0.8 -0.6
plant Tuber-Atlantic +0.4 -1.8 -1.0 -0.0 +0.6
control LB +0.1 -0.0 +0.2 -0.8 -0.4
control LB +0.3 +0.1 -0.0 -1.1 -0.2
remove
HER17_RS02945
plot		 remove
HER17_RS02950
plot		 remove
HER17_RS02955		 remove
HER17_RS02960
plot		 remove
HER17_RS02965
plot