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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS02200 and HER17_RS02205 are separated by 27 nucleotides
HER17_RS02205 and HER17_RS02210 are separated by 91 nucleotides
HER17_RS02210 and HER17_RS02215 are separated by 56 nucleotides
HER17_RS02215 and HER17_RS02220 are separated by 67 nucleotides
HER17_RS02200: HER17_RS02200 - alternative ribosome-rescue factor A, at 490,521 to 490,736
_RS02200
HER17_RS02205: HER17_RS02205 - large-conductance mechanosensitive channel protein MscL, at 490,764 to 491,177
_RS02205
HER17_RS02210: HER17_RS02210 - Trk system potassium transporter TrkA, at 491,269 to 492,645
_RS02210
HER17_RS02215: HER17_RS02215 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 492,702 to 493,991
_RS02215
HER17_RS02220: HER17_RS02220 - methionyl-tRNA formyltransferase, at 494,059 to 495,006
_RS02220
Group
Condition
HER17
_RS02200
HER17
_RS02205
HER17
_RS02210
HER17
_RS02215
HER17
_RS02220
control
LB
-0.7
-0.6
-2.1
-0.0
N.D.
control
LB
-0.2
-0.3
-2.1
-0.1
N.D.
carbon source
M9+glucose+arginine
-0.3
+0.1
-2.1
-0.2
N.D.
carbon source
M9+glucose+arginine
+0.5
-0.1
-2.5
-0.3
N.D.
control
LB
+0.2
-0.3
-2.1
-0.2
N.D.
control
LB
+0.0
-0.5
-1.8
-0.1
N.D.
control
LB
-0.2
-0.3
-1.7
-0.1
N.D.
carbon source
M9+glucose
+0.5
+0.2
-2.6
-0.3
N.D.
carbon source
M9+sucrose
-0.1
-0.0
-1.9
-0.1
N.D.
carbon source
M9+polygalacturonate
-0.2
-0.0
-1.8
-0.1
N.D.
carbon source
M9+glycerol
+0.1
+0.0
-2.2
+0.0
N.D.
control
LB
+0.2
+0.1
-1.9
-0.1
N.D.
carbon source
M9+glycerol
+0.0
-0.3
-1.2
+0.0
N.D.
carbon source
M9+polygalacturonate
+0.2
-0.2
-1.2
-0.1
N.D.
carbon source
M9+starch
+0.2
-0.1
-1.1
-0.1
N.D.
carbon source
M9+glycerol
-0.6
+0.2
-0.8
+0.1
N.D.
carbon source
M9+glycerol
-0.1
-0.0
-0.9
+0.0
N.D.
carbon source
M9+starch
+0.6
+0.0
-1.5
-0.1
N.D.
carbon source
M9+glucose
+0.5
-0.1
-1.0
-0.2
N.D.
plant
Tuber-Atlantic
+0.3
+0.3
-1.1
-0.1
N.D.
carbon source
M9+glycerol
-0.0
+0.1
-0.6
+0.1
N.D.
carbon source
M9+glucose
+0.4
+0.4
-1.0
-0.3
N.D.
carbon source
M9+glycerol
-0.0
+0.0
-0.5
+0.0
N.D.
carbon source
M9+sucrose
+0.5
+0.1
-0.9
-0.1
N.D.
carbon source
M9+sucrose
+0.3
-0.1
-0.4
-0.1
N.D.
carbon source
M9+polygalacturonate
+0.1
+0.1
-0.5
+0.0
N.D.
carbon source
M9+starch
+0.2
-0.1
-0.2
-0.0
N.D.
plant
Tuber-Atlantic
+0.2
+0.1
-0.0
-0.2
N.D.
plant
Tuber-Atlantic
+0.4
+0.8
-1.0
+0.1
N.D.
carbon source
M9+glucose+arginine
+0.8
+0.3
-0.5
-0.1
N.D.
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