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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS02000 and HER17_RS02005 overlap by 4 nucleotides
HER17_RS02005 and HER17_RS02010 are separated by 178 nucleotides
HER17_RS02010 and HER17_RS02015 overlap by 1 nucleotides
HER17_RS02015 and HER17_RS02020 are separated by 9 nucleotides
HER17_RS02000: HER17_RS02000 - two-component system response regulator PmrA, at 466,593 to 467,261
_RS02000
HER17_RS02005: HER17_RS02005 - phosphoethanolamine transferase EptA, at 467,258 to 468,904
_RS02005
HER17_RS02010: HER17_RS02010 - transcriptional regulator, at 469,083 to 469,805
_RS02010
HER17_RS02015: HER17_RS02015 - sulfurtransferase complex subunit TusD, at 469,805 to 470,194
_RS02015
HER17_RS02020: HER17_RS02020 - sulfurtransferase complex subunit TusC, at 470,204 to 470,563
_RS02020
Group
Condition
HER17
_RS02000
HER17
_RS02005
HER17
_RS02010
HER17
_RS02015
HER17
_RS02020
plant
Tuber-Atlantic
-0.4
+0.0
-0.4
N.D.
N.D.
carbon source
M9+polygalacturonate
-0.0
-0.0
-0.4
N.D.
N.D.
carbon source
M9+glucose+arginine
-0.1
-0.0
-0.1
N.D.
N.D.
control
LB
+0.0
+0.0
-0.3
N.D.
N.D.
carbon source
M9+glycerol
+0.1
-0.1
-0.2
N.D.
N.D.
carbon source
M9+polygalacturonate
-0.2
-0.0
+0.1
N.D.
N.D.
control
LB
+0.1
-0.0
-0.2
N.D.
N.D.
control
LB
+0.2
-0.1
-0.2
N.D.
N.D.
plant
Tuber-Atlantic
-0.2
+0.0
+0.1
N.D.
N.D.
carbon source
M9+glycerol
-0.0
-0.0
-0.1
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.1
-0.0
-0.2
N.D.
N.D.
carbon source
M9+glycerol
+0.1
-0.0
-0.1
N.D.
N.D.
carbon source
M9+glucose+arginine
+0.1
+0.1
-0.2
N.D.
N.D.
carbon source
M9+glycerol
+0.1
-0.0
-0.0
N.D.
N.D.
control
LB
+0.0
-0.1
+0.1
N.D.
N.D.
control
LB
-0.0
+0.1
-0.0
N.D.
N.D.
carbon source
M9+glucose
+0.1
+0.0
-0.1
N.D.
N.D.
carbon source
M9+sucrose
-0.1
-0.0
+0.2
N.D.
N.D.
carbon source
M9+glycerol
+0.1
+0.0
-0.0
N.D.
N.D.
carbon source
M9+glycerol
+0.1
+0.0
+0.0
N.D.
N.D.
carbon source
M9+glucose
+0.3
-0.0
-0.1
N.D.
N.D.
carbon source
M9+starch
+0.2
-0.0
+0.1
N.D.
N.D.
plant
Tuber-Atlantic
-0.1
+0.1
+0.3
N.D.
N.D.
carbon source
M9+starch
-0.1
+0.0
+0.3
N.D.
N.D.
carbon source
M9+sucrose
-0.0
+0.1
+0.3
N.D.
N.D.
plant
Tuber-Atlantic
+0.0
+0.1
+0.2
N.D.
N.D.
carbon source
M9+glucose
+0.2
-0.1
+0.2
N.D.
N.D.
carbon source
M9+glucose+arginine
+0.1
-0.0
+0.3
N.D.
N.D.
carbon source
M9+starch
+0.0
+0.0
+0.3
N.D.
N.D.
carbon source
M9+sucrose
+0.2
+0.1
+0.3
N.D.
N.D.
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