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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS00825 and HER17_RS00830 are separated by 53 nucleotides
HER17_RS00830 and HER17_RS00835 are separated by 570 nucleotides
HER17_RS00835 and HER17_RS00840 are separated by 119 nucleotides
HER17_RS00840 and HER17_RS00845 are separated by 134 nucleotides
HER17_RS00825: HER17_RS00825 - glycerol kinase GlpK, at 192,567 to 194,078
_RS00825
HER17_RS00830: HER17_RS00830 - aquaporin family protein, at 194,132 to 194,971
_RS00830
HER17_RS00835: HER17_RS00835 - septal ring assembly protein ZapB, at 195,542 to 195,781
_RS00835
HER17_RS00840: HER17_RS00840 - ribonuclease E activity regulator RraA, at 195,901 to 196,386
_RS00840
HER17_RS00845: HER17_RS00845 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 196,521 to 197,438
_RS00845
Group
Condition
HER17
_RS00825
HER17
_RS00830
HER17
_RS00835
HER17
_RS00840
HER17
_RS00845
carbon source
M9+glycerol
-2.3
-1.2
N.D.
-0.6
+0.0
carbon source
M9+glycerol
-1.8
-1.1
N.D.
-0.9
+0.1
carbon source
M9+glycerol
-2.0
-1.4
N.D.
+0.2
-0.1
carbon source
M9+glycerol
-1.8
-1.4
N.D.
-0.2
+0.2
carbon source
M9+glycerol
-1.7
-1.2
N.D.
-0.2
+0.0
plant
Tuber-Atlantic
-0.8
-0.0
N.D.
-0.5
-0.8
plant
Tuber-Atlantic
+0.1
+0.1
N.D.
-1.2
-1.0
carbon source
M9+glycerol
-1.5
-1.1
N.D.
+0.5
+0.1
plant
Tuber-Atlantic
-0.6
-0.4
N.D.
-0.1
-0.8
plant
Tuber-Atlantic
-0.3
-0.2
N.D.
+0.0
-1.3
carbon source
M9+starch
-0.3
-0.1
N.D.
-0.4
-0.1
carbon source
M9+starch
-0.4
-0.1
N.D.
-0.1
-0.2
control
LB
-0.0
+0.0
N.D.
-0.6
-0.0
carbon source
M9+starch
-0.4
-0.2
N.D.
+0.1
-0.2
control
LB
+0.0
-0.2
N.D.
-0.3
+0.0
control
LB
+0.1
+0.2
N.D.
-0.3
+0.1
carbon source
M9+polygalacturonate
+0.1
+0.5
N.D.
-0.3
-0.1
carbon source
M9+polygalacturonate
-0.3
+0.1
N.D.
+0.4
+0.0
control
LB
+0.1
+0.2
N.D.
+0.0
+0.0
control
LB
+0.1
+0.2
N.D.
+0.2
+0.1
carbon source
M9+polygalacturonate
+0.1
+0.5
N.D.
+0.3
-0.1
carbon source
M9+sucrose
+0.3
+0.6
N.D.
-0.0
-0.1
carbon source
M9+sucrose
+0.4
+0.6
N.D.
+0.3
-0.2
carbon source
M9+sucrose
+0.3
+0.8
N.D.
+0.4
-0.1
carbon source
M9+glucose+arginine
+2.9
+2.9
N.D.
-0.8
+0.2
carbon source
M9+glucose+arginine
+2.8
+2.9
N.D.
+0.1
-0.1
carbon source
M9+glucose
+3.1
+3.4
N.D.
-0.4
+0.1
carbon source
M9+glucose+arginine
+2.8
+2.8
N.D.
+0.5
+0.2
carbon source
M9+glucose
+3.3
+3.4
N.D.
-0.3
+0.2
carbon source
M9+glucose
+3.3
+3.0
N.D.
+0.7
+0.1
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