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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS00710 and HER17_RS00715 are separated by 299 nucleotides
HER17_RS00715 and HER17_RS00720 are separated by 76 nucleotides
HER17_RS00720 and HER17_RS00725 are separated by 206 nucleotides
HER17_RS00725 and HER17_RS00730 are separated by 506 nucleotides
HER17_RS00710: HER17_RS00710 - SWIM zinc finger domain-containing protein, at 165,712 to 167,784
_RS00710
HER17_RS00715: HER17_RS00715 - sugar transporter, at 168,084 to 169,271
_RS00715
HER17_RS00720: HER17_RS00720 - CDF family cation-efflux transporter FieF, at 169,348 to 170,250
_RS00720
HER17_RS00725: HER17_RS00725 - 6-phosphofructokinase, at 170,457 to 171,419
_RS00725
HER17_RS00730: HER17_RS00730 - LysR family transcriptional regulator, at 171,926 to 172,855
_RS00730
Group
Condition
HER17
_RS00710
HER17
_RS00715
HER17
_RS00720
HER17
_RS00725
HER17
_RS00730
carbon source
M9+sucrose
+0.0
+0.0
+0.1
-4.1
-0.1
carbon source
M9+sucrose
+0.1
-0.0
+0.1
-4.0
-0.1
carbon source
M9+starch
+0.1
+0.2
-0.1
-3.9
-0.2
carbon source
M9+sucrose
+0.2
-0.0
-0.2
-3.7
+0.0
carbon source
M9+starch
+0.1
+0.1
+0.1
-3.9
-0.1
carbon source
M9+starch
+0.0
+0.0
-0.0
-3.6
-0.1
plant
Tuber-Atlantic
-0.1
+0.1
+0.0
-3.1
-0.0
plant
Tuber-Atlantic
-0.1
+0.1
+0.1
-3.1
-0.1
plant
Tuber-Atlantic
-0.2
+0.4
-0.2
-2.4
+0.0
plant
Tuber-Atlantic
-0.2
+0.1
+0.4
-2.4
+0.1
carbon source
M9+glucose+arginine
-0.1
+0.0
+0.1
-1.6
-0.3
carbon source
M9+polygalacturonate
+0.1
+0.1
-0.2
-1.9
+0.1
carbon source
M9+polygalacturonate
-0.0
+0.2
-0.4
-1.3
-0.1
carbon source
M9+glucose
+0.1
+0.1
-0.1
-1.4
-0.1
carbon source
M9+polygalacturonate
-0.0
+0.1
-0.0
-1.2
-0.1
carbon source
M9+glucose+arginine
-0.0
+0.2
+0.0
-1.2
-0.1
control
LB
-0.0
-0.1
+0.2
-1.2
+0.1
carbon source
M9+glucose+arginine
-0.0
+0.1
+0.0
-1.1
+0.0
carbon source
M9+glucose
+0.1
+0.3
+0.3
-1.8
+0.1
control
LB
+0.1
+0.1
-0.0
-1.0
-0.0
control
LB
-0.0
-0.1
+0.1
-0.7
-0.1
carbon source
M9+glucose
+0.1
+0.1
+0.2
-1.3
+0.3
control
LB
+0.0
+0.1
-0.0
-0.6
-0.0
control
LB
+0.1
+0.1
+0.1
-0.7
-0.0
control
LB
+0.0
-0.1
+0.2
-0.7
+0.1
carbon source
M9+glycerol
+0.1
-0.1
-0.1
-0.2
-0.0
carbon source
M9+glycerol
+0.1
+0.1
-0.2
-0.2
-0.1
carbon source
M9+glycerol
+0.1
-0.1
-0.0
-0.2
+0.2
carbon source
M9+glycerol
+0.2
-0.0
-0.0
-0.1
-0.1
carbon source
M9+glycerol
+0.0
-0.0
-0.0
+0.2
-0.1
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