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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS00105 and HER17_RS00110 overlap by 1 nucleotides
HER17_RS00110 and HER17_RS00115 overlap by 4 nucleotides
HER17_RS00115 and HER17_RS00120 are separated by 39 nucleotides
HER17_RS00120 and HER17_RS00125 are separated by 75 nucleotides
HER17_RS00105: HER17_RS00105 - nucleoside hydrolase, at 22,306 to 23,295
_RS00105
HER17_RS00110: HER17_RS00110 - ABC transporter permease, at 23,295 to 24,272
_RS00110
HER17_RS00115: HER17_RS00115 - ABC transporter permease, at 24,269 to 25,177
_RS00115
HER17_RS00120: HER17_RS00120 - ABC transporter ATP-binding protein, at 25,217 to 27,022
_RS00120
HER17_RS00125: HER17_RS00125 - DUF1471 domain-containing protein, at 27,098 to 27,355
_RS00125
Group
Condition
HER17
_RS00105
HER17
_RS00110
HER17
_RS00115
HER17
_RS00120
HER17
_RS00125
plant
Tuber-Atlantic
-0.2
-0.4
+0.2
-0.4
-0.6
carbon source
M9+glucose
-0.2
-0.3
-0.3
-0.2
-0.0
plant
Tuber-Atlantic
+0.1
+0.0
-0.1
-0.3
-0.7
carbon source
M9+glucose+arginine
-0.4
-0.2
-0.2
-0.2
+0.1
control
LB
-0.0
-0.0
-0.2
-0.0
-0.5
control
LB
-0.2
-0.1
-0.1
-0.1
-0.2
carbon source
M9+starch
-0.1
-0.0
-0.1
-0.3
-0.1
carbon source
M9+glucose
-0.2
-0.2
-0.3
+0.1
+0.2
control
LB
-0.2
-0.1
+0.0
-0.1
-0.2
carbon source
M9+polygalacturonate
+0.1
-0.4
+0.1
-0.1
-0.2
carbon source
M9+glycerol
-0.3
-0.1
+0.0
+0.1
-0.1
control
LB
-0.2
-0.1
-0.1
+0.0
-0.1
carbon source
M9+glycerol
-0.2
-0.1
-0.0
+0.1
-0.2
plant
Tuber-Atlantic
+0.1
-0.2
+0.1
-0.1
-0.2
plant
Tuber-Atlantic
-0.4
-0.3
+0.3
+0.1
+0.0
carbon source
M9+glucose+arginine
-0.3
-0.1
+0.1
+0.2
-0.1
carbon source
M9+glycerol
-0.2
-0.1
+0.2
+0.1
-0.1
carbon source
M9+sucrose
+0.0
-0.2
-0.0
+0.0
-0.0
control
LB
-0.0
-0.1
-0.0
+0.0
+0.0
carbon source
M9+glycerol
-0.1
-0.0
+0.1
+0.0
-0.1
carbon source
M9+glucose+arginine
+0.2
-0.3
+0.2
-0.1
-0.1
carbon source
M9+polygalacturonate
-0.1
+0.0
-0.0
+0.1
-0.0
carbon source
M9+sucrose
+0.1
-0.1
+0.1
+0.1
-0.2
carbon source
M9+starch
+0.1
-0.0
-0.0
+0.0
-0.1
carbon source
M9+sucrose
+0.2
+0.1
+0.1
-0.1
-0.2
carbon source
M9+starch
+0.1
-0.1
+0.2
-0.1
-0.1
carbon source
M9+glycerol
-0.1
+0.2
-0.0
-0.1
+0.2
control
LB
+0.1
-0.1
+0.1
+0.0
+0.0
carbon source
M9+glucose
+0.3
-0.0
+0.0
-0.3
+0.2
carbon source
M9+glycerol
-0.0
+0.0
-0.0
+0.3
+0.1
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HER17_RS00115
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