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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
lysB and HEPCGN_26760 overlap by 4 nucleotides
HEPCGN_26760 and rrrD are separated by 1 nucleotides
rrrD and HEPCGN_26770 overlap by 20 nucleotides
HEPCGN_26770 and gpX are separated by 3 nucleotides
HEPCGN_26755: lysB - Rz-like lysis system protein LysB, at 4,103,016 to 4,103,444
lysB
HEPCGN_26760: HEPCGN_26760 - Putative membrane protein, at 4,103,441 to 4,103,818
_26760
HEPCGN_26765: rrrD - glycoside hydrolase, at 4,103,820 to 4,104,332
rrrD
HEPCGN_26770: HEPCGN_26770 - Bacteriophage holin family HP1, at 4,104,313 to 4,104,528
_26770
HEPCGN_26775: gpX - phage tail protein, at 4,104,532 to 4,104,735
gpX
Group
Condition
HEPCGN
_26755
HEPCGN
_26760
HEPCGN
_26765
HEPCGN
_26770
HEPCGN
_26775
lysB
rrrD
gpX
phage
TP7
N.D.
+0.3
-1.7
-0.0
N.D.
phage
TP7
N.D.
+0.2
+0.6
-2.0
N.D.
no phage control
Control_ECOR38
N.D.
-0.1
-0.4
-0.3
N.D.
phage
Bas38
N.D.
+0.3
-0.5
-0.5
N.D.
phage
Bas39
N.D.
-0.0
-0.3
-0.4
N.D.
phage
Bas38
N.D.
+0.2
-0.3
-0.3
N.D.
phage
Bas51
N.D.
+0.1
+0.1
-0.6
N.D.
carbon source
Casamino-acids
N.D.
+0.1
-0.3
-0.1
N.D.
phage
RB23
N.D.
+0.1
-0.2
-0.1
N.D.
phage
Bas19
N.D.
+0.6
-0.3
-0.5
N.D.
phage
Bas39
N.D.
+0.1
+0.6
-0.8
N.D.
no phage control
Control_ECOR38
N.D.
+0.1
+0.1
-0.4
N.D.
carbon source
D-Glucose
N.D.
-0.2
-0.0
+0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
+0.4
-0.3
-0.1
N.D.
phage
K20
N.D.
+0.6
-0.6
+0.2
N.D.
carbon source
Casamino-acids
N.D.
+0.4
+0.4
-0.5
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.1
-0.1
+0.5
N.D.
phage
Bas55
N.D.
+0.3
+0.1
+0.0
N.D.
phage
Phi92
N.D.
+0.1
+0.4
+0.3
N.D.
phage
Bas55
N.D.
+0.6
-0.0
+0.2
N.D.
phage
K20
N.D.
+0.3
-0.0
+0.6
N.D.
carbon source
L-Arabinose
N.D.
+0.0
+0.1
+0.6
N.D.
carbon source
L-Arabinose
N.D.
+0.2
+0.5
+0.3
N.D.
phage
RB68
N.D.
+0.1
+0.7
+0.3
N.D.
phage
RB23
N.D.
+0.2
+0.6
+0.2
N.D.
phage
Bas19
N.D.
+0.5
+0.6
+0.1
N.D.
phage
Bas48
N.D.
+0.4
+0.3
+0.7
N.D.
phage
Bas48
N.D.
+0.5
+0.6
+0.6
N.D.
phage
Phi92
N.D.
+0.2
+1.5
+0.9
N.D.
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