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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
spoIVCA and HEPCGN_26715 are separated by 142 nucleotides
HEPCGN_26715 and HEPCGN_26720 overlap by 17 nucleotides
HEPCGN_26720 and gpI overlap by 4 nucleotides
gpI and HEPCGN_26730 overlap by 8 nucleotides
HEPCGN_26710: spoIVCA - DNA-invertase, at 4,096,847 to 4,097,413
spoIVCA
HEPCGN_26715: HEPCGN_26715 - Phage tail sheath protein FI, at 4,097,556 to 4,098,518
_26715
HEPCGN_26720: HEPCGN_26720 - phage tail protein, at 4,098,502 to 4,099,557
_26720
HEPCGN_26725: gpI - phage tail protein I, at 4,099,554 to 4,100,159
gpI
HEPCGN_26730: HEPCGN_26730 - baseplate assembly protein, at 4,100,152 to 4,101,060
_26730
Group
Condition
HEPCGN
_26710
HEPCGN
_26715
HEPCGN
_26720
HEPCGN
_26725
HEPCGN
_26730
spoIVCA
gpI
phage
Bas48
-0.8
+0.1
-0.4
+0.4
-0.1
phage
Bas19
-0.6
-0.2
-0.3
+0.7
-0.3
phage
RB23
-0.3
+0.1
+0.4
-0.1
-0.5
carbon source
D-Glucose
+0.2
+0.1
+0.2
-0.4
-0.6
phage
K20
-0.1
+0.1
-0.1
-0.1
-0.4
phage
RB23
-0.8
-0.1
+0.4
+0.1
+0.0
no phage control
Control_ECOR38
+0.0
+0.0
-0.3
-0.0
+0.0
phage
Bas38
+0.0
-0.1
-0.0
+0.0
-0.2
phage
Bas19
+0.4
-0.1
-0.3
+0.4
-0.5
phage
Phi92
-0.6
-0.3
+0.0
+0.1
+1.0
carbon source
Casamino-acids
+0.1
-0.6
+0.1
+0.2
+0.5
phage
TP7
-0.4
-0.1
-0.2
+0.3
+0.7
carbon source
Sodium-DL-Lactate
-0.2
+0.1
+0.2
+0.5
-0.2
phage
Bas48
+0.4
-0.3
-0.0
+0.3
+0.2
carbon source
L-Arabinose
+0.1
-0.2
+0.4
+0.4
-0.0
no phage control
Control_ECOR38
+0.2
-0.1
+0.4
+0.2
-0.1
phage
Bas51
+0.3
+0.2
+0.0
+0.4
-0.1
phage
Bas55
-0.5
+0.3
-0.2
+0.5
+0.7
phage
Phi92
-0.2
+0.1
+0.1
+0.6
+0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.2
+0.3
+0.1
phage
Bas39
+0.1
+0.2
+0.2
+0.4
+0.0
phage
Bas55
+0.4
+0.0
-0.2
+0.4
+0.2
phage
K20
+0.0
+0.1
+0.3
+0.6
+0.1
carbon source
Casamino-acids
+0.6
+0.2
+0.2
+0.5
-0.5
phage
Bas38
+0.3
+0.2
+0.1
+0.6
+0.0
carbon source
L-Arabinose
+0.8
-0.2
+0.3
+0.7
-0.3
phage
Bas39
+0.4
+0.3
+0.1
+0.3
+0.2
phage
RB68
-0.1
+0.3
+0.3
+0.6
+0.6
phage
TP7
+1.0
+0.3
-0.1
+0.7
-0.3
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