Fitness for 5 genes in Escherichia coli ECOR38

Add gene:

Number of genes on each side:  

Top 29 experiments (either direction), sorted by average fitness

Or view all 29 experiments or choose conditions or try the comparative fitness browser

500 ntttcA and uspF are separated by 175 nucleotidesuspF and ompN are separated by 140 nucleotidesompN and nifJ are separated by 360 nucleotidesnifJ and ydbJ are separated by 273 nucleotides HEPCGN_26005: ttcA - tRNA 2-thiocytidine(32) synthetase TtcA, at 3,938,292 to 3,939,227 ttcA HEPCGN_26010: uspF - universal stress protein UspF, at 3,939,403 to 3,939,837 uspF HEPCGN_26015: ompN - porin OmpN, at 3,939,978 to 3,941,111 ompN HEPCGN_26025: nifJ - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 3,941,472 to 3,944,996 nifJ HEPCGN_26030: ydbJ - Uncharacterized protein YdbJ, at 3,945,270 to 3,945,536 ydbJ
Group Condition HEPCGN_26005 HEPCGN_26010 HEPCGN_26015 HEPCGN_26025 HEPCGN_26030
ttcA uspF ompN nifJ ydbJ
phage Bas48 -0.1 -0.5 -0.2 +0.0 -0.2
phage TP7 +0.3 -0.2 -0.2 -0.1 -0.3
no phage control Control_ECOR38 -0.1 -0.0 -0.3 -0.2 +0.1
phage TP7 +0.3 -0.4 -0.1 +0.0 -0.3
phage Bas19 -0.1 +0.5 -0.2 -0.1 -0.4
phage Bas51 -0.2 +0.3 -0.1 -0.0 -0.2
phage Bas38 +0.0 +0.3 -0.1 -0.1 -0.2
phage Bas19 +0.1 -0.2 -0.5 +0.1 +0.4
carbon source Sodium-DL-Lactate +0.1 +0.1 -0.3 -0.1 +0.2
phage Bas39 -0.2 +0.5 -0.3 -0.0 -0.0
phage Bas55 +0.1 -0.0 -0.0 +0.1 -0.0
no phage control Control_ECOR38 -0.1 +0.3 -0.1 -0.1 +0.1
phage RB68 +0.4 -0.3 -0.0 +0.0 +0.0
phage RB23 +0.2 +0.3 +0.1 +0.0 -0.4
carbon source Casamino-acids +0.1 +0.4 +0.1 +0.1 -0.4
carbon source Casamino-acids -0.0 -0.0 -0.1 -0.0 +0.4
phage K20 -0.2 +0.4 -0.0 +0.1 -0.0
carbon source D-Glucose +0.0 +0.1 +0.4 -0.1 -0.1
phage RB23 +0.2 +0.1 -0.2 +0.0 +0.1
phage Phi92 +0.6 -0.2 -0.4 +0.2 +0.1
phage Bas39 -0.1 +0.3 -0.2 +0.0 +0.2
carbon source L-Arabinose -0.2 +0.5 +0.0 +0.0 +0.1
phage Bas55 +0.1 +0.1 +0.1 +0.0 +0.1
phage Bas38 +0.2 +0.1 -0.1 -0.1 +0.2
phage K20 +0.3 +0.1 +0.1 +0.0 -0.1
phage Phi92 +0.6 +0.3 -0.1 -0.0 -0.1
carbon source L-Arabinose -0.2 +0.7 +0.1 -0.1 +0.1
phage Bas48 -0.0 -0.2 +0.1 +0.1 +0.7
carbon source Sodium-DL-Lactate -0.1 +0.6 +0.1 +0.0 +0.2
remove
HEPCGN_26005
plot
remove
HEPCGN_26010
plot
remove
HEPCGN_26015
remove
HEPCGN_26025
plot
remove
HEPCGN_26030
plot