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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
yciO and yciQ are separated by 27 nucleotides
yciQ and rluB are separated by 210 nucleotides
rluB and HEPCGN_25565 are separated by 169 nucleotides
HEPCGN_25565 and HEPCGN_25570 are separated by 99 nucleotides
HEPCGN_25550: yciO - L-threonylcarbamoyladenylate synthase, at 3,846,617 to 3,847,237
yciO
HEPCGN_25555: yciQ - Uncharacterized protein YciQ, at 3,847,265 to 3,849,154
yciQ
HEPCGN_25560: rluB - 23S rRNA pseudouridine(2605) synthase RluB, at 3,849,365 to 3,850,240
rluB
HEPCGN_25565: HEPCGN_25565 - Putative lipoprotein, at 3,850,410 to 3,851,321
_25565
HEPCGN_25570: HEPCGN_25570 - hypothetical protein, at 3,851,421 to 3,851,729
_25570
Group
Condition
HEPCGN
_25550
HEPCGN
_25555
HEPCGN
_25560
HEPCGN
_25565
HEPCGN
_25570
yciO
yciQ
rluB
phage
RB49
-0.4
+0.0
-2.0
N.D.
N.D.
phage
Bas21
-0.4
-0.1
-1.6
N.D.
N.D.
phage
JK38
-0.0
-0.2
-1.0
N.D.
N.D.
phage
JK36
-0.1
-0.2
-0.9
N.D.
N.D.
phage
Bas67
-0.3
-0.2
-0.4
N.D.
N.D.
phage
K20
-0.0
-0.2
-0.7
N.D.
N.D.
phage
Bas67
-0.1
+0.0
-0.8
N.D.
N.D.
phage
K5
-0.1
-0.0
-0.7
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.2
-0.0
-0.6
N.D.
N.D.
phage
Bas19
-0.6
+0.0
-0.1
N.D.
N.D.
phage
Bas61
+0.1
+0.2
-1.1
N.D.
N.D.
phage
Bas38
-0.1
+0.1
-0.5
N.D.
N.D.
phage
JK42
-0.0
+0.0
-0.5
N.D.
N.D.
phage
K5
+0.3
-0.1
-0.7
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.4
+0.0
-0.8
N.D.
N.D.
phage
JK42
-0.1
+0.1
-0.4
N.D.
N.D.
phage
RB49
+0.2
-0.0
-0.6
N.D.
N.D.
phage
Bas39
+0.1
-0.2
-0.3
N.D.
N.D.
carbon source
Casamino-acids
+0.0
+0.2
-0.5
N.D.
N.D.
carbon source
D-Glucose
-0.3
+0.2
-0.3
N.D.
N.D.
phage
JK38
+0.2
+0.0
-0.4
N.D.
N.D.
phage
K25
+0.4
+0.1
-0.6
N.D.
N.D.
phage
TP12
+0.2
+0.1
-0.5
N.D.
N.D.
phage
K20
+0.3
-0.3
+0.1
N.D.
N.D.
phage
TP7
-0.4
-0.2
+0.8
N.D.
N.D.
phage
TP7
+0.1
-0.2
+0.3
N.D.
N.D.
phage
RB68
-0.1
-0.1
+0.5
N.D.
N.D.
phage
Phi92
-0.1
-0.5
+1.3
N.D.
N.D.
phage
RB23
+0.5
+0.1
+0.3
N.D.
N.D.
phage
Phi92
-0.3
+0.1
+1.6
N.D.
N.D.
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