Fitness for 5 genes in Escherichia coli ECOR38

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500 ntyciE and yciF are separated by 93 nucleotidesyciF and yciG are separated by 85 nucleotidesyciG and trpA are separated by 380 nucleotidestrpA and trpB overlap by 1 nucleotides HEPCGN_25500: yciE - Protein YciE, at 3,837,237 to 3,837,695 yciE HEPCGN_25505: yciF - Protein YciF, at 3,837,789 to 3,838,289 yciF HEPCGN_25510: yciG - Uncharacterized protein YciG, at 3,838,375 to 3,838,554 yciG HEPCGN_25515: trpA - tryptophan synthase subunit alpha, at 3,838,935 to 3,839,741 trpA HEPCGN_25520: trpB - tryptophan synthase subunit beta, at 3,839,741 to 3,840,934 trpB
Group Condition HEPCGN_25500 HEPCGN_25505 HEPCGN_25510 HEPCGN_25515 HEPCGN_25520
yciE yciF yciG trpA trpB
carbon source D-Glucose +0.4 +0.0 N.D. -5.2 -6.3
carbon source Sodium-DL-Lactate -0.4 -0.6 N.D. -5.0 -4.8
carbon source Sodium-DL-Lactate -0.3 +0.4 N.D. -4.2 -6.3
carbon source L-Arabinose -0.4 +0.2 N.D. -4.0 -2.9
carbon source L-Arabinose -0.5 -0.2 N.D. -3.5 -2.7
carbon source Casamino-acids -0.3 -0.1 N.D. -3.1 -2.1
carbon source Casamino-acids -0.0 -0.3 N.D. -2.7 -2.1
phage Bas51 -1.2 -1.2 N.D. +0.1 -0.1
phage Phi92 -0.6 -1.0 N.D. -0.2 -0.1
no phage control Control_ECOR38 -1.5 +0.2 N.D. +0.1 +0.1
phage RB23 -0.6 -0.3 N.D. -0.2 +0.2
no phage control Control_ECOR38 -0.2 -0.5 N.D. +0.2 -0.3
phage Bas38 -0.9 +0.4 N.D. -0.0 -0.1
phage Bas55 -0.2 -0.4 N.D. +0.2 -0.0
phage RB23 -0.5 -0.2 N.D. +0.2 -0.0
phage K20 +0.4 -0.3 N.D. -0.3 -0.1
phage Bas48 -0.2 -0.4 N.D. +0.4 -0.0
phage RB68 +0.2 -0.1 N.D. +0.0 -0.3
phage TP7 +0.4 -0.1 N.D. -0.4 +0.0
phage Bas55 -0.0 -0.2 N.D. +0.2 -0.0
phage Bas48 +0.1 -0.4 N.D. +0.3 +0.0
phage Bas19 +0.3 -0.4 N.D. +0.3 +0.0
phage Bas39 -0.3 +0.4 N.D. +0.1 +0.1
phage Bas38 -0.2 +0.5 N.D. +0.1 -0.1
phage Bas39 +0.1 +0.3 N.D. +0.1 -0.1
phage Bas19 +0.8 -0.2 N.D. +0.2 -0.0
phage K20 +1.7 -0.5 N.D. +0.2 -0.0
phage TP7 +1.1 +0.2 N.D. +0.6 +0.2
phage Phi92 +1.2 +0.8 N.D. +0.2 +0.1
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