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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
Arg_trna and Arg_trna are separated by 13 nucleotides
Arg_trna and HEPCGN_25305 are separated by 974 nucleotides
HEPCGN_25305 and HEPCGN_25310 are separated by 150 nucleotides
HEPCGN_25310 and HEPCGN_25315 are separated by 4 nucleotides
HEPCGN_25285: Arg_trna - tRNA-Arg(tcg), at 3,802,454 to 3,802,530
_trna
HEPCGN_25290: Arg_trna - tRNA-Arg(tct), at 3,802,544 to 3,802,620
_trna
HEPCGN_25305: HEPCGN_25305 - 9-O-acetyl-N-acetylneuraminic acid deacetylase, at 3,803,595 to 3,805,448
_25305
HEPCGN_25310: HEPCGN_25310 - holin, at 3,805,599 to 3,805,814
_25310
HEPCGN_25315: HEPCGN_25315 - DUF1327 domain-containing protein, at 3,805,819 to 3,806,163
_25315
Group
Condition
HEPCGN
_25285
HEPCGN
_25290
HEPCGN
_25305
HEPCGN
_25310
HEPCGN
_25315
Arg_trna
Arg_trna
phage
Phi92
N.D.
-0.2
+0.2
-1.6
N.D.
phage
RB23
N.D.
-0.3
-0.0
-1.2
N.D.
phage
Bas48
N.D.
-0.9
+0.0
-0.1
N.D.
phage
K20
N.D.
-0.5
+0.1
-0.4
N.D.
phage
TP7
N.D.
-0.1
-0.2
-0.1
N.D.
phage
Phi92
N.D.
-0.2
+0.2
-0.4
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.5
+0.1
+0.0
N.D.
phage
Bas19
N.D.
-0.2
-0.2
+0.1
N.D.
carbon source
D-Glucose
N.D.
-0.4
+0.0
+0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.1
-0.1
-0.0
N.D.
phage
RB23
N.D.
-0.4
+0.1
+0.1
N.D.
phage
Bas48
N.D.
-0.3
+0.1
+0.0
N.D.
carbon source
Casamino-acids
N.D.
+0.0
-0.0
-0.1
N.D.
carbon source
L-Arabinose
N.D.
-0.3
-0.0
+0.2
N.D.
phage
K20
N.D.
-0.0
+0.1
-0.1
N.D.
phage
Bas55
N.D.
+0.2
+0.0
-0.1
N.D.
phage
Bas51
N.D.
+0.2
+0.2
-0.4
N.D.
carbon source
Casamino-acids
N.D.
+0.0
+0.1
+0.1
N.D.
phage
Bas38
N.D.
+0.1
-0.1
+0.5
N.D.
phage
RB68
N.D.
-0.0
+0.1
+0.4
N.D.
phage
Bas38
N.D.
-0.4
+0.2
+0.7
N.D.
phage
Bas39
N.D.
+0.2
+0.0
+0.3
N.D.
phage
Bas55
N.D.
-0.2
+0.2
+0.5
N.D.
no phage control
Control_ECOR38
N.D.
+0.4
+0.2
+0.0
N.D.
no phage control
Control_ECOR38
N.D.
+0.5
+0.1
+0.2
N.D.
phage
Bas19
N.D.
+0.2
+0.1
+0.6
N.D.
carbon source
L-Arabinose
N.D.
+0.3
+0.1
+0.4
N.D.
phage
Bas39
N.D.
+0.6
+0.1
+0.4
N.D.
phage
TP7
N.D.
+0.7
+0.1
+0.7
N.D.
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