Fitness for 5 genes in Escherichia coli ECOR38

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500 ntoppB and oppC are separated by 14 nucleotidesoppC and oppD are separated by 11 nucleotidesoppD and oppF overlap by 4 nucleotidesoppF and cls are separated by 52 nucleotides HEPCGN_25100: oppB - oligopeptide ABC transporter permease OppB, at 3,774,943 to 3,775,863 oppB HEPCGN_25105: oppC - oligopeptide ABC transporter permease OppC, at 3,775,878 to 3,776,786 oppC HEPCGN_25110: oppD - murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD, at 3,776,798 to 3,777,811 oppD HEPCGN_25115: oppF - murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF, at 3,777,808 to 3,778,812 oppF HEPCGN_25120: cls - cardiolipin synthase, at 3,778,865 to 3,779,194 cls
Group Condition HEPCGN_25100 HEPCGN_25105 HEPCGN_25110 HEPCGN_25115 HEPCGN_25120
oppB oppC oppD oppF cls
phage Bas39 -0.5 -0.3 -0.5 -0.8 +0.2
phage RB23 -0.1 -0.1 -0.2 +0.2 -1.5
phage Phi92 +0.0 -0.4 +0.2 +0.4 -1.7
no phage control Control_ECOR38 -0.5 -0.8 -0.4 +0.1 +0.4
phage Bas51 -0.5 +0.3 -0.5 -0.5 +0.3
phage Bas19 +0.1 +0.1 +0.0 +0.2 -1.2
phage Bas19 -0.1 -0.1 -0.2 +0.2 -0.3
phage Bas38 -0.2 +0.0 -0.2 +0.0 -0.2
phage K20 +0.0 -0.2 +0.2 +0.3 -0.7
phage Bas55 -0.0 -0.1 +0.1 -0.0 -0.4
carbon source L-Arabinose -0.2 -0.1 -0.0 -0.3 +0.1
phage RB23 -0.0 -0.2 -0.0 +0.2 -0.3
phage Bas48 -0.0 +0.6 +0.1 +0.3 -1.2
phage Phi92 -0.2 -0.4 -0.3 +0.5 +0.2
carbon source Sodium-DL-Lactate +0.1 -0.0 +0.2 -0.1 -0.3
carbon source Sodium-DL-Lactate +0.0 -0.1 +0.3 -0.1 -0.2
phage Bas39 -0.2 +0.5 +0.0 -0.1 -0.4
phage K20 +0.0 +0.1 -0.2 +0.2 -0.1
phage Bas48 -0.0 +0.1 +0.1 -0.1 -0.1
phage RB68 +0.0 -0.3 +0.3 +0.1 -0.0
phage Bas38 -0.1 +0.2 -0.1 +0.1 +0.0
carbon source D-Glucose +0.0 +0.1 +0.1 +0.1 +0.0
no phage control Control_ECOR38 -0.2 +0.5 -0.1 -0.1 +0.3
phage TP7 +0.3 -0.3 -0.1 +0.4 +0.1
carbon source Casamino-acids +0.1 -0.2 +0.1 +0.1 +0.4
phage Bas55 +0.1 -0.1 +0.2 +0.3 +0.1
phage TP7 +0.1 -0.8 +0.4 +0.9 +0.1
carbon source L-Arabinose +0.1 +0.3 -0.1 -0.0 +0.6
carbon source Casamino-acids +0.2 +0.1 +0.1 +0.5 -0.1
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