Fitness for 5 genes in Escherichia coli ECOR38

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500 ntemtA and ycgR are separated by 1 nucleotidesycgR and ymgE are separated by 200 nucleotidesymgE and fepA are separated by 49 nucleotidesfepA and modD are separated by 25 nucleotides HEPCGN_24805: emtA - membrane-bound lytic murein transglycosylase EmtA, at 3,714,573 to 3,715,184 emtA HEPCGN_24810: ycgR - Flagellar brake protein YcgR, at 3,715,186 to 3,715,920 ycgR HEPCGN_24815: ymgE - UPF0410 protein YmgE, at 3,716,121 to 3,716,375 ymgE HEPCGN_24820: fepA - TonB-dependent receptor, at 3,716,425 to 3,718,395 fepA HEPCGN_24825: modD - Putative pyrophosphorylase ModD, at 3,718,421 to 3,719,275 modD
Group Condition HEPCGN_24805 HEPCGN_24810 HEPCGN_24815 HEPCGN_24820 HEPCGN_24825
emtA ycgR ymgE fepA modD
carbon source Sodium-DL-Lactate +0.1 +0.1 -0.3 -0.1 -0.3
carbon source D-Glucose +0.0 -0.0 -0.2 -0.0 -0.2
phage Bas48 -0.0 -0.3 +0.1 -0.0 -0.1
phage Bas55 -0.1 +0.3 -0.2 -0.0 -0.1
carbon source Casamino-acids +0.2 +0.2 -0.2 -0.1 -0.2
phage Bas38 -0.2 -0.1 -0.0 +0.0 +0.1
phage TP7 +0.3 +0.1 -0.2 -0.1 -0.2
phage Bas19 +0.1 -0.2 +0.3 -0.1 -0.2
no phage control Control_ECOR38 -0.2 +0.2 +0.0 +0.0 -0.1
carbon source L-Arabinose +0.2 -0.0 -0.3 +0.1 +0.1
carbon source L-Arabinose +0.2 -0.4 +0.2 +0.1 +0.1
carbon source Sodium-DL-Lactate -0.0 -0.1 +0.1 +0.1 +0.1
carbon source Casamino-acids +0.1 -0.1 +0.1 -0.0 +0.1
phage K20 +0.1 -0.4 +0.2 +0.2 +0.2
phage Phi92 +0.3 -0.5 +0.4 +0.1 +0.0
phage Bas39 +0.2 +0.3 -0.1 +0.1 -0.0
phage Bas38 +0.3 +0.2 -0.2 -0.0 +0.1
phage Bas55 +0.2 +0.2 -0.2 +0.2 -0.0
phage Bas48 +0.2 -0.6 +0.4 +0.1 +0.3
phage K20 +0.0 -0.1 +0.4 +0.1 +0.0
phage Bas39 +0.2 +0.3 -0.0 +0.2 -0.2
no phage control Control_ECOR38 +0.1 +0.0 +0.1 +0.1 +0.2
phage RB23 +0.6 +0.1 -0.2 +0.1 +0.1
phage Bas19 +0.5 -0.1 +0.3 -0.1 +0.3
phage RB23 +0.5 +0.1 +0.0 +0.1 +0.1
phage RB68 +0.2 +0.3 +0.3 +0.1 +0.2
phage TP7 +0.5 +0.1 +0.4 +0.0 +0.1
phage Phi92 -0.1 -0.2 +1.1 +0.1 +0.1
phage Bas51 +0.2 +0.3 +0.2 +0.1 +0.2
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