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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
minC and ycgJ are separated by 519 nucleotides
ycgJ and HEPCGN_24680 are separated by 119 nucleotides
HEPCGN_24680 and ycgL are separated by 240 nucleotides
ycgL and ycgM are separated by 71 nucleotides
HEPCGN_24670: minC - septum site-determining protein MinC, at 3,689,446 to 3,690,141
minC
HEPCGN_24675: ycgJ - Uncharacterized protein YcgJ, at 3,690,661 to 3,691,029
ycgJ
HEPCGN_24680: HEPCGN_24680 - inhibitor of g-type lysozyme, at 3,691,149 to 3,691,550
_24680
HEPCGN_24685: ycgL - Protein YcgL, at 3,691,791 to 3,692,084
ycgL
HEPCGN_24690: ycgM - fumarylacetoacetate hydrolase family protein, at 3,692,156 to 3,692,815
ycgM
Group
Condition
HEPCGN
_24670
HEPCGN
_24675
HEPCGN
_24680
HEPCGN
_24685
HEPCGN
_24690
minC
ycgJ
ycgL
ycgM
phage
TP7
-4.6
-0.4
-0.0
+0.4
+0.0
phage
Phi92
-2.5
-0.4
-0.3
-0.9
-0.0
phage
TP7
-3.6
-0.5
-0.1
+0.4
-0.2
phage
Phi92
-3.3
-0.3
-0.3
+0.0
+0.5
phage
Bas48
-2.5
-0.6
-0.3
-0.1
+0.3
phage
RB23
-1.5
-0.0
-0.2
-1.4
+0.1
phage
Bas19
-0.3
-0.1
+0.1
-1.5
-0.2
phage
Bas48
-1.7
+0.2
-0.1
+0.2
-0.5
phage
RB23
-1.3
+0.1
-0.2
-0.3
-0.1
phage
RB68
-0.2
-1.1
+0.2
-0.0
-0.2
phage
Bas05
-0.7
-0.3
-0.3
-0.3
+0.2
phage
Bas55
-1.3
-0.2
-0.0
+0.2
+0.0
phage
RB49
-0.6
+0.5
-0.1
-0.9
-0.2
phage
TP12
-0.1
-0.5
+0.2
-0.9
+0.1
phage
K25
-0.6
+0.2
+0.0
-0.9
+0.1
phage
K5
-0.2
+0.0
+0.2
-0.8
-0.3
phage
TP15
+0.1
+0.1
+0.2
-1.1
-0.1
no phage control
Control_ECOR38
+0.5
-0.2
-0.5
-0.7
+0.2
phage
Bas51
-1.2
-0.0
+0.0
+0.6
-0.1
phage
Bas45
+0.2
+0.2
-0.0
-0.9
-0.1
phage
K5
+0.4
+0.1
+0.0
-0.7
-0.2
phage
JK36
+0.3
+0.6
-0.2
-0.4
+0.1
carbon source
Sodium-DL-Lactate
+0.4
+0.7
+0.1
-0.1
-0.1
phage
Bas07
+0.6
-0.0
-0.2
+0.3
+0.4
carbon source
L-Arabinose
-0.1
+0.6
-0.1
-0.0
+0.6
phage
Bas67
+0.6
+0.3
+0.2
-0.3
+0.2
phage
RB49
+0.3
-0.3
+0.2
+0.8
+0.2
carbon source
Sodium-DL-Lactate
+0.4
-0.1
-0.1
+0.8
+0.4
carbon source
Casamino-acids
+0.2
+0.4
+0.4
+0.4
+0.1
phage
CEV1
+1.6
-0.0
+0.3
-0.3
-0.1
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