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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_24425 and HEPCGN_24430 are separated by 94 nucleotides
HEPCGN_24430 and HEPCGN_24435 overlap by 39 nucleotides
HEPCGN_24435 and HEPCGN_24440 are separated by 2 nucleotides
HEPCGN_24440 and HEPCGN_24445 overlap by 1 nucleotides
HEPCGN_24425: HEPCGN_24425 - phage tail assembly protein, at 3,653,825 to 3,654,160
_24425
HEPCGN_24430: HEPCGN_24430 - hypothetical protein, at 3,654,255 to 3,654,395
_24430
HEPCGN_24435: HEPCGN_24435 - Phage-like protein, at 3,654,357 to 3,654,539
_24435
HEPCGN_24440: HEPCGN_24440 - phage major tail tube protein, at 3,654,542 to 3,655,063
_24440
HEPCGN_24445: HEPCGN_24445 - phage tail protein, at 3,655,063 to 3,656,490
_24445
Group
Condition
HEPCGN
_24425
HEPCGN
_24430
HEPCGN
_24435
HEPCGN
_24440
HEPCGN
_24445
phage
Bas48
-1.2
N.D.
+0.3
-0.9
-0.1
phage
RB23
-1.1
N.D.
+0.3
-0.4
+0.1
phage
Bas39
+0.0
N.D.
-0.8
+0.1
-0.1
carbon source
L-Arabinose
-0.8
N.D.
-0.1
+0.2
-0.0
phage
Bas51
-0.2
N.D.
-0.4
-0.0
-0.0
phage
Bas38
+0.2
N.D.
-0.5
-0.2
-0.0
phage
Bas19
-0.3
N.D.
-0.3
-0.1
+0.0
phage
Bas39
-0.7
N.D.
-0.0
+0.1
-0.0
phage
TP7
-0.1
N.D.
-0.1
-0.4
+0.1
phage
Bas38
-0.2
N.D.
-0.4
+0.0
+0.1
phage
TP7
-0.3
N.D.
-0.3
+0.0
+0.0
phage
K20
-0.3
N.D.
-0.1
+0.1
+0.2
no phage control
Control_ECOR38
-0.1
N.D.
-0.7
+0.8
-0.2
phage
K20
-0.2
N.D.
-0.1
+0.4
-0.1
carbon source
Casamino-acids
-0.1
N.D.
+0.1
+0.1
-0.1
phage
Bas55
+0.1
N.D.
-0.5
+0.3
+0.2
phage
Bas55
+0.1
N.D.
-0.5
+0.3
+0.1
no phage control
Control_ECOR38
-0.1
N.D.
-0.3
+0.4
+0.1
carbon source
Sodium-DL-Lactate
-0.4
N.D.
+0.1
+0.4
+0.0
carbon source
L-Arabinose
+0.5
N.D.
-0.6
-0.0
+0.4
phage
RB23
-0.2
N.D.
+0.1
+0.4
+0.0
carbon source
Sodium-DL-Lactate
+0.8
N.D.
-0.4
+0.1
-0.1
carbon source
Casamino-acids
+0.1
N.D.
+0.1
+0.2
+0.1
phage
Bas19
+0.4
N.D.
-0.2
+0.1
+0.3
phage
Phi92
+1.1
N.D.
-0.2
-0.6
+0.3
phage
Bas48
+0.6
N.D.
-0.4
+0.1
+0.2
carbon source
D-Glucose
+0.5
N.D.
+0.8
+0.1
+0.1
phage
RB68
+1.1
N.D.
-0.1
+0.3
+0.4
phage
Phi92
+0.7
N.D.
+1.3
+0.9
-0.2
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