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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
phoQ and phoP overlap by 1 nucleotides
phoP and HEPCGN_24205 are separated by 43 nucleotides
HEPCGN_24205 and purB are separated by 23 nucleotides
purB and hflD are separated by 3 nucleotides
HEPCGN_24195: phoQ - two-component system sensor histidine kinase PhoQ, at 3,620,934 to 3,622,394
phoQ
HEPCGN_24200: phoP - two-component system response regulator PhoP, at 3,622,394 to 3,623,065
phoP
HEPCGN_24205: HEPCGN_24205 - hypothetical protein, at 3,623,109 to 3,623,210
_24205
HEPCGN_24210: purB - adenylosuccinate lyase, at 3,623,234 to 3,624,604
purB
HEPCGN_24215: hflD - high frequency lysogenization protein HflD, at 3,624,608 to 3,625,249
hflD
Group
Condition
HEPCGN
_24195
HEPCGN
_24200
HEPCGN
_24205
HEPCGN
_24210
HEPCGN
_24215
phoQ
phoP
purB
hflD
phage
Phi92
-3.4
-4.0
N.D.
N.D.
+0.7
phage
Phi92
-3.6
-0.7
N.D.
N.D.
+1.0
phage
Bas48
-0.8
-0.2
N.D.
N.D.
-1.1
phage
Bas48
-0.4
-0.3
N.D.
N.D.
-0.9
phage
Bas38
-0.1
-0.0
N.D.
N.D.
-0.6
phage
RB68
+0.0
+0.1
N.D.
N.D.
-0.7
phage
Bas51
-0.1
+0.0
N.D.
N.D.
-0.5
carbon source
L-Arabinose
+0.3
+0.5
N.D.
N.D.
-1.4
phage
Bas55
-0.0
+0.1
N.D.
N.D.
-0.5
carbon source
Casamino-acids
+0.1
+0.3
N.D.
N.D.
-0.9
carbon source
Casamino-acids
-0.0
+0.1
N.D.
N.D.
-0.4
phage
K20
-0.0
+0.2
N.D.
N.D.
-0.5
phage
Bas38
-0.0
-0.3
N.D.
N.D.
+0.1
no phage control
Control_ECOR38
+0.1
+0.1
N.D.
N.D.
-0.4
phage
Bas55
-0.0
+0.0
N.D.
N.D.
-0.2
phage
Bas39
-0.1
-0.2
N.D.
N.D.
+0.1
no phage control
Control_ECOR38
+0.0
+0.1
N.D.
N.D.
-0.2
phage
Bas39
+0.1
-0.0
N.D.
N.D.
-0.2
phage
K20
-0.0
+0.1
N.D.
N.D.
-0.1
carbon source
L-Arabinose
+0.1
+0.4
N.D.
N.D.
-0.5
carbon source
D-Glucose
+0.1
+0.3
N.D.
N.D.
-0.3
carbon source
Sodium-DL-Lactate
-0.2
+0.0
N.D.
N.D.
+0.4
phage
Bas19
+0.4
+0.5
N.D.
N.D.
-0.5
carbon source
Sodium-DL-Lactate
-0.1
+0.3
N.D.
N.D.
+0.5
phage
Bas19
+0.5
+0.6
N.D.
N.D.
-0.2
phage
RB23
+0.6
+1.0
N.D.
N.D.
+0.0
phage
TP7
+1.2
+1.3
N.D.
N.D.
-0.3
phage
RB23
+1.0
+1.0
N.D.
N.D.
+0.1
phage
TP7
+1.5
+1.5
N.D.
N.D.
-0.1
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