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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
flgD and flgE are separated by 24 nucleotides
flgE and flgF are separated by 19 nucleotides
flgF and flgG are separated by 136 nucleotides
flgG and flgL are separated by 52 nucleotides
HEPCGN_23825: flgD - flagellar hook assembly protein FlgD, at 3,553,586 to 3,554,281
flgD
HEPCGN_23830: flgE - flagellar hook protein FlgE, at 3,554,306 to 3,555,508
flgE
HEPCGN_23835: flgF - flagellar basal-body rod protein FlgF, at 3,555,528 to 3,556,283
flgF
HEPCGN_23840: flgG - flagellar basal-body rod protein FlgG, at 3,556,420 to 3,557,202
flgG
HEPCGN_23845: flgL - flagellar hook-associated protein FlgL, at 3,557,255 to 3,558,181
flgL
Group
Condition
HEPCGN
_23825
HEPCGN
_23830
HEPCGN
_23835
HEPCGN
_23840
HEPCGN
_23845
flgD
flgE
flgF
flgG
flgL
phage
TP7
-1.4
-0.7
-1.7
-0.0
-0.2
phage
JK36
-0.2
+0.0
-1.6
+0.0
-0.4
phage
Bas55
+0.5
-0.2
-1.0
-0.1
-0.9
phage
TP15
-0.8
-0.2
-0.4
-0.1
-0.2
phage
K20
+0.2
+0.0
-1.4
-0.1
-0.2
phage
Phi92
-0.1
+0.1
-0.7
-0.2
-0.6
phage
JK38
-0.8
-0.2
+0.1
-0.1
-0.3
phage
RB23
-1.5
-0.3
+0.7
+0.1
-0.3
no phage control
Control_ECOR38
-1.0
-0.1
+0.0
+0.1
-0.0
phage
Phi92
+0.3
-0.1
-1.3
+0.1
-0.0
phage
RB68
+0.5
-0.3
-1.1
-0.1
+0.0
phage
Bas38
-0.4
+0.2
-0.8
-0.0
+0.1
phage
Bas38
-0.2
-0.1
-0.5
+0.1
-0.2
phage
RB23
+0.3
-0.3
-0.8
+0.1
-0.2
no phage control
Control_ECOR38
+0.2
+0.1
-0.7
-0.1
-0.3
carbon source
L-Arabinose
+0.2
+0.2
-0.8
-0.1
+0.0
phage
JK42
+0.2
-0.1
-0.5
+0.1
-0.2
phage
Bas05
-0.5
+0.0
+0.3
+0.1
-0.3
phage
Bas67
+0.3
-0.3
-0.4
-0.0
+0.1
phage
TP7
+0.4
-0.1
+0.3
-0.4
-0.3
phage
JK38
-0.1
-0.1
+0.5
+0.2
-0.3
carbon source
L-Arabinose
+0.5
-0.1
-0.2
-0.1
+0.3
phage
TP15
-0.6
+0.2
+0.7
+0.1
+0.0
phage
CEV1
-0.4
-0.3
+1.5
+0.1
-0.4
phage
Bas19
+0.9
+0.0
-0.3
+0.0
-0.0
phage
Bas67
-0.5
+0.2
+0.7
+0.3
+0.1
phage
Bas61
+0.5
+0.1
+0.5
+0.0
-0.3
phage
K5
+0.5
-0.0
+0.4
+0.1
-0.1
phage
Bas48
+0.9
-0.1
+0.1
+0.1
+0.2
phage
RB49
+0.4
+0.0
+0.4
+0.1
+0.5
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