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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
mglC and preA are separated by 70 nucleotides
preA and preT overlap by 7 nucleotides
preT and yeiS are separated by 193 nucleotides
yeiS and sanA are separated by 2 nucleotides
HEPCGN_22810: mglC - galactose/methyl galactoside ABC transporter permease MglC, at 3,338,693 to 3,339,703
mglC
HEPCGN_22815: preA - NAD-dependent dihydropyrimidine dehydrogenase subunit PreA, at 3,339,774 to 3,341,009
preA
HEPCGN_22820: preT - NAD-dependent dihydropyrimidine dehydrogenase subunit PreT, at 3,341,003 to 3,342,241
preT
HEPCGN_22825: yeiS - Uncharacterized protein YeiS, at 3,342,435 to 3,342,674
yeiS
HEPCGN_22830: sanA - outer membrane permeability protein SanA, at 3,342,677 to 3,343,396
sanA
Group
Condition
HEPCGN
_22810
HEPCGN
_22815
HEPCGN
_22820
HEPCGN
_22825
HEPCGN
_22830
mglC
preA
preT
yeiS
sanA
phage
TP7
+0.2
+0.1
+0.0
-0.7
-5.9
phage
RB23
-0.2
+0.2
-0.2
-0.7
-3.1
phage
TP7
+0.2
+0.1
-0.3
+0.1
-3.5
phage
Bas48
-0.1
+0.2
-0.8
-0.2
-1.7
phage
RB23
-0.3
+0.2
-0.3
+0.1
-2.0
phage
Bas19
-0.2
+0.1
-0.0
-0.8
-1.1
phage
Bas48
+0.0
+0.3
-0.5
-0.1
-1.6
carbon source
L-Arabinose
+0.0
-0.0
+0.0
-0.4
-0.9
carbon source
Sodium-DL-Lactate
-0.1
-0.0
+0.1
-0.3
-0.9
carbon source
L-Arabinose
-0.0
+0.2
-0.1
-0.4
-0.7
phage
Bas19
+0.2
-0.0
+0.3
-0.2
-1.3
phage
Bas55
-0.2
+0.1
-0.5
+0.1
-0.7
phage
K20
-0.0
+0.1
-0.1
-0.2
-0.7
carbon source
D-Glucose
+0.1
+0.0
+0.1
-0.5
-0.5
carbon source
Casamino-acids
-0.0
+0.0
-0.1
-0.1
-0.5
phage
Bas51
-0.2
-0.2
-0.1
+0.1
-0.1
phage
K20
-0.1
+0.2
+0.1
-0.4
-0.3
phage
RB68
+0.3
+0.3
-0.3
-0.5
-0.4
carbon source
Sodium-DL-Lactate
-0.2
+0.2
+0.2
+0.1
-0.7
phage
Bas38
-0.1
-0.1
-0.2
+0.2
-0.2
phage
Bas39
-0.1
-0.1
-0.1
+0.1
-0.2
phage
Bas55
-0.1
+0.1
-0.6
+0.6
-0.4
carbon source
Casamino-acids
-0.0
+0.2
+0.1
-0.2
-0.2
phage
Bas38
-0.0
+0.0
+0.1
-0.0
+0.0
no phage control
Control_ECOR38
-0.0
+0.0
+0.0
+0.2
+0.0
no phage control
Control_ECOR38
-0.1
-0.1
+0.1
+0.5
-0.1
phage
Bas39
-0.0
-0.2
+0.4
+0.2
+0.0
phage
Phi92
-0.1
+0.0
-0.3
-0.0
+0.9
phage
Phi92
+0.1
+0.1
+0.3
-0.4
+1.0
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