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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
yeiH and yieE are separated by 98 nucleotides
yieE and lysP are separated by 204 nucleotides
lysP and HEPCGN_22770 are separated by 292 nucleotides
HEPCGN_22770 and cirA are separated by 89 nucleotides
HEPCGN_22755: yeiH - UPF0324 membrane protein YeiH, at 3,325,700 to 3,326,749
yeiH
HEPCGN_22760: yieE - DNA-binding transcriptional regulator YeiE, at 3,326,848 to 3,327,729
yieE
HEPCGN_22765: lysP - lysine-specific permease, at 3,327,934 to 3,329,403
lysP
HEPCGN_22770: HEPCGN_22770 - hypothetical protein, at 3,329,696 to 3,330,553
_22770
HEPCGN_22775: cirA - catecholate siderophore receptor CirA, at 3,330,643 to 3,331,668
cirA
Group
Condition
HEPCGN
_22755
HEPCGN
_22760
HEPCGN
_22765
HEPCGN
_22770
HEPCGN
_22775
yeiH
yieE
lysP
cirA
phage
TP7
-0.6
-0.2
-0.5
+0.0
-0.2
phage
Bas07
-0.2
-0.1
-0.2
+0.0
-0.3
phage
Bas19
-0.0
+0.1
-0.6
+0.2
-0.3
phage
JK36
-0.1
-0.3
-0.0
-0.1
-0.2
phage
JK42
-0.1
-0.3
-0.2
+0.2
-0.2
phage
Bas39
-0.1
-0.1
-0.5
+0.0
+0.1
phage
K25
-0.1
-0.1
+0.1
-0.5
-0.0
phage
JK38
-0.0
+0.1
-0.5
-0.0
-0.1
phage
K20
+0.1
-0.1
-0.5
-0.1
+0.1
phage
K25
+0.1
-0.2
-0.3
-0.0
-0.1
carbon source
Casamino-acids
+0.0
-0.0
-0.3
-0.2
+0.0
phage
RB23
+0.2
+0.1
-0.4
-0.1
-0.2
phage
Bas19
+0.0
-0.1
-0.5
+0.1
+0.1
phage
JK36
+0.3
-0.1
-0.4
-0.1
-0.1
phage
Bas61
+0.1
+0.0
-0.4
+0.1
-0.1
no phage control
Control_ECOR38
+0.1
-0.1
-0.3
-0.1
-0.1
phage
Bas67
+0.2
-0.2
-0.1
-0.1
-0.0
carbon source
L-Arabinose
-0.0
-0.5
+0.3
+0.1
-0.1
phage
TP2
+0.1
-0.1
-0.4
+0.2
-0.1
phage
TP7
+0.4
+0.0
-0.5
-0.0
-0.0
phage
TP12
+0.2
-0.1
-0.4
+0.3
-0.1
carbon source
L-Arabinose
+0.4
-0.3
+0.2
-0.3
-0.0
phage
RB49
+0.2
+0.1
-0.4
+0.1
-0.0
phage
Bas67
-0.1
+0.0
-0.3
+0.5
+0.1
phage
Phi92
+0.1
-0.1
+0.2
+0.3
-0.2
carbon source
Sodium-DL-Lactate
+0.4
-0.1
+0.1
+0.0
-0.1
phage
Bas21
+0.3
+0.3
-0.4
+0.0
+0.1
phage
TP15
+0.3
+0.2
+0.0
-0.1
+0.1
phage
Bas09
+0.2
+0.0
-0.0
+0.2
+0.2
phage
Phi92
+0.6
+0.0
+0.2
-0.0
+0.0
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