Fitness for 5 genes in Escherichia coli ECOR38

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500 ntrcsD and ompC are separated by 738 nucleotidesompC and apbE are separated by 111 nucleotidesapbE and ada are separated by 73 nucleotidesada and alkB overlap by 1 nucleotides HEPCGN_22455: rcsD - phosphotransferase RcsD, at 3,262,309 to 3,264,981 rcsD HEPCGN_22465: ompC - porin OmpC, at 3,265,720 to 3,266,814 ompC HEPCGN_22470: apbE - FAD:protein FMN transferase ApbE, at 3,266,926 to 3,267,981 apbE HEPCGN_22475: ada - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 3,268,055 to 3,269,119 ada HEPCGN_22480: alkB - DNA oxidative demethylase AlkB, at 3,269,119 to 3,269,769 alkB
Group Condition HEPCGN_22455 HEPCGN_22465 HEPCGN_22470 HEPCGN_22475 HEPCGN_22480
rcsD ompC apbE ada alkB
phage RB23 +0.2 -0.8 -3.1 +0.3 +0.3
phage TP7 +0.5 -0.9 -3.2 +0.3 +0.6
phage TP7 +0.8 -0.8 -2.9 -0.1 +0.4
phage Bas19 +0.1 -0.1 -2.2 -0.1 +0.0
phage RB23 +0.0 -0.5 -0.9 -0.1 +0.1
phage Bas19 +0.2 -0.4 -1.1 -0.4 +0.3
phage Bas48 +0.1 +0.3 -1.5 -0.0 +0.1
phage Bas39 -0.1 -0.1 -0.5 -0.2 +0.1
phage K20 -0.2 -0.2 -1.1 +0.3 +0.4
phage Bas55 -0.0 -0.1 -0.8 -0.1 +0.2
phage RB68 -0.1 -0.0 -0.4 -0.1 -0.1
carbon source Casamino-acids -0.1 -0.0 -0.6 +0.1 +0.0
carbon source Casamino-acids -0.2 +0.2 -0.5 -0.2 +0.1
phage Bas51 +0.0 -0.2 -0.0 -0.1 -0.2
phage Bas38 -0.1 -0.1 -0.2 +0.0 -0.1
no phage control Control_ECOR38 +0.1 +0.0 -0.2 -0.1 -0.2
phage Bas55 +0.0 -0.2 -0.5 +0.1 +0.2
phage Bas38 -0.1 +0.1 -0.5 +0.0 +0.2
carbon source Sodium-DL-Lactate -0.4 -0.1 +0.1 +0.0 +0.2
carbon source Sodium-DL-Lactate -0.3 +0.1 -0.3 +0.1 +0.1
phage Bas39 -0.1 +0.0 +0.0 -0.1 -0.0
no phage control Control_ECOR38 -0.1 -0.1 +0.0 -0.1 +0.1
carbon source L-Arabinose -0.1 +0.0 +0.0 +0.0 +0.0
carbon source D-Glucose +0.1 +0.1 -0.3 +0.2 +0.0
phage K20 -0.0 -0.0 -0.4 +0.1 +0.5
carbon source L-Arabinose -0.1 +0.3 +0.2 +0.2 +0.3
phage Bas48 +0.2 +0.7 -0.5 +0.5 +0.0
phage Phi92 -0.1 +1.0 +0.6 -0.1 +0.5
phage Phi92 -0.2 +0.9 +0.9 +0.3 +0.3
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