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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
glpT and glpQ are separated by 4 nucleotides
glpQ and lysR are separated by 19 nucleotides
lysR and araJ are separated by 151 nucleotides
araJ and inaA are separated by 80 nucleotides
HEPCGN_22310: glpT - glycerol-3-phosphate transporter, at 3,220,634 to 3,221,992
glpT
HEPCGN_22315: glpQ - glycerophosphodiester phosphodiesterase, at 3,221,997 to 3,223,073
glpQ
HEPCGN_22320: lysR - transcriptional regulator, at 3,223,093 to 3,223,992
lysR
HEPCGN_22325: araJ - MFS transporter, at 3,224,144 to 3,225,334
araJ
HEPCGN_22330: inaA - lipopolysaccharide kinase InaA, at 3,225,415 to 3,226,065
inaA
Group
Condition
HEPCGN
_22310
HEPCGN
_22315
HEPCGN
_22320
HEPCGN
_22325
HEPCGN
_22330
glpT
glpQ
lysR
araJ
inaA
phage
TP7
-0.3
-0.3
-0.2
-0.1
+0.3
phage
Bas48
+0.0
-0.1
-0.1
-0.0
-0.1
phage
Bas39
-0.2
+0.1
+0.0
-0.1
-0.2
phage
Phi92
+0.2
-0.0
-0.4
-0.0
+0.0
phage
Bas55
-0.1
-0.2
+0.2
-0.1
+0.0
phage
Phi92
-0.4
-0.3
+0.4
+0.0
-0.0
carbon source
L-Arabinose
+0.2
-0.2
+0.1
-0.2
-0.0
phage
Bas38
-0.0
-0.1
+0.1
+0.1
-0.2
phage
Bas51
+0.0
-0.1
-0.1
+0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.2
-0.1
+0.1
+0.0
carbon source
L-Arabinose
+0.1
-0.0
-0.2
-0.2
+0.2
phage
Bas39
+0.1
-0.1
+0.1
+0.1
-0.2
phage
K20
-0.1
-0.2
+0.1
+0.0
+0.1
carbon source
Casamino-acids
+0.1
-0.1
-0.1
+0.1
+0.0
no phage control
Control_ECOR38
+0.1
+0.1
-0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.0
-0.1
+0.1
+0.1
phage
Bas19
+0.0
-0.1
+0.1
-0.0
+0.0
no phage control
Control_ECOR38
-0.0
+0.0
+0.0
-0.0
+0.0
phage
Bas38
+0.1
-0.0
-0.2
+0.3
-0.0
phage
RB23
-0.3
-0.3
+0.5
-0.0
+0.2
phage
Bas48
+0.2
+0.3
+0.0
-0.3
+0.1
phage
TP7
-0.4
+0.2
+0.5
-0.1
+0.0
phage
Bas19
-0.1
+0.0
+0.3
+0.0
+0.1
phage
K20
+0.1
-0.1
+0.1
+0.3
-0.1
carbon source
Casamino-acids
-0.1
-0.1
+0.1
+0.3
+0.1
phage
Bas55
-0.0
-0.0
+0.3
+0.0
+0.1
carbon source
D-Glucose
+0.2
-0.0
+0.0
+0.1
+0.1
phage
RB23
-0.0
-0.3
+0.6
+0.2
+0.2
phage
RB68
-0.0
+0.1
-0.0
+0.3
+0.5
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