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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
nudI and yfaZ are separated by 277 nucleotides
yfaZ and yfaY are separated by 99 nucleotides
yfaY and rhmR are separated by 219 nucleotides
rhmR and HEPCGN_22240 are separated by 14 nucleotides
HEPCGN_22220: nudI - nucleoside triphosphatase NudI, at 3,202,973 to 3,203,398
nudI
HEPCGN_22225: yfaZ - Outer membrane protein YfaZ, at 3,203,676 to 3,204,218
yfaZ
HEPCGN_22230: yfaY - nicotinamide mononucleotide deamidase-related protein YfaY, at 3,204,318 to 3,205,520
yfaY
HEPCGN_22235: rhmR - Uncharacterized HTH-type transcriptional regulator RhmR, at 3,205,740 to 3,206,522
rhmR
HEPCGN_22240: HEPCGN_22240 - Putative dehydratase, at 3,206,537 to 3,207,121
_22240
Group
Condition
HEPCGN
_22220
HEPCGN
_22225
HEPCGN
_22230
HEPCGN
_22235
HEPCGN
_22240
nudI
yfaZ
yfaY
rhmR
phage
Bas38
-0.4
-0.2
-0.0
-0.1
-0.4
phage
TP7
+0.4
-1.0
-0.0
+0.2
-0.6
no phage control
Control_ECOR38
-0.1
-0.3
-0.1
+0.1
-0.1
phage
Bas38
-0.3
-0.0
-0.0
-0.0
-0.1
phage
RB23
-0.4
+0.1
+0.1
-0.1
-0.2
phage
Bas51
-0.2
-0.2
+0.1
+0.0
-0.1
phage
K20
+0.1
-0.1
+0.2
-0.2
-0.4
no phage control
Control_ECOR38
-0.5
-0.1
+0.3
+0.1
-0.1
phage
RB23
-0.1
+0.0
-0.1
-0.0
-0.1
phage
TP7
+0.6
-0.1
-0.2
-0.2
-0.4
phage
Bas39
+0.0
+0.1
+0.0
-0.1
-0.3
carbon source
L-Arabinose
+0.1
-0.2
+0.1
-0.4
+0.2
phage
Bas48
+0.4
-0.4
+0.1
-0.2
-0.0
phage
Bas19
+0.3
-0.2
+0.4
-0.2
-0.4
phage
Bas48
+0.5
-0.2
+0.1
-0.2
-0.3
phage
Bas55
+0.5
-0.1
-0.1
-0.2
-0.1
phage
RB68
+0.2
-0.3
+0.4
-0.2
-0.2
carbon source
L-Arabinose
+0.3
-0.1
+0.1
+0.1
-0.2
phage
Bas39
+0.4
-0.0
+0.1
-0.0
-0.3
phage
Bas55
+0.4
+0.2
-0.0
-0.1
+0.0
phage
Phi92
-0.1
-0.2
-0.1
+0.1
+0.9
phage
K20
+0.5
+0.0
-0.0
+0.1
-0.1
phage
Phi92
+0.3
-0.2
-0.1
-0.0
+0.6
carbon source
Casamino-acids
+0.3
+0.5
-0.0
+0.1
-0.3
carbon source
D-Glucose
+0.5
+0.1
+0.1
+0.1
-0.1
phage
Bas19
+0.7
-0.1
+0.0
-0.2
+0.3
carbon source
Casamino-acids
+0.3
+0.5
+0.1
-0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.2
+0.1
+0.0
+0.3
carbon source
Sodium-DL-Lactate
+0.7
+0.3
-0.0
+0.2
+0.0
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