Fitness for 5 genes in Escherichia coli ECOR38

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500 ntarnA and arnC overlap by 1 nucleotidesarnC and arnB are separated by 3 nucleotidesarnB and ais are separated by 289 nucleotidesais and nudI are separated by 38 nucleotides HEPCGN_22200: arnA - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 3,197,931 to 3,199,913 arnA HEPCGN_22205: arnC - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 3,199,913 to 3,200,881 arnC HEPCGN_22210: arnB - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 3,200,885 to 3,202,042 arnB HEPCGN_22215: ais - Lipopolysaccharide core heptose(II)-phosphate phosphatase, at 3,202,332 to 3,202,934 ais HEPCGN_22220: nudI - nucleoside triphosphatase NudI, at 3,202,973 to 3,203,398 nudI
Group Condition HEPCGN_22200 HEPCGN_22205 HEPCGN_22210 HEPCGN_22215 HEPCGN_22220
arnA arnC arnB ais nudI
phage TP15 -0.2 -0.3 -0.0 -0.4 -0.1
phage TP12 -0.1 -0.3 +0.1 -0.4 -0.3
phage Bas18 +0.1 -0.5 -0.2 -0.4 -0.0
phage Bas05 +0.3 -0.0 -0.1 -0.3 -0.8
no phage control Control_ECOR38 +0.0 -0.2 +0.1 -0.1 -0.6
phage RB49 +0.1 -0.4 +0.4 -0.2 -0.6
phage Bas07 -0.1 +0.1 +0.2 -0.3 -0.6
phage JK42 -0.1 +0.0 +0.1 -0.4 -0.3
phage TP2 +0.1 -0.2 +0.2 -0.2 -0.5
carbon source Sodium-DL-Lactate -0.1 -0.2 -0.2 -0.3 +0.2
no phage control Control_ECOR38 -0.1 +0.1 -0.1 +0.1 -0.5
phage CEV1 +0.1 -0.3 +0.1 -0.2 -0.2
phage TP15 +0.1 -0.3 +0.2 -0.2 +0.1
phage K20 -0.0 -0.3 +0.3 -0.2 +0.1
phage Bas48 -0.1 -0.4 +0.1 +0.0 +0.4
carbon source D-Glucose +0.1 -0.0 -0.2 -0.2 +0.5
phage K25 -0.1 -0.2 +0.0 -0.1 +0.7
phage Bas39 -0.2 -0.2 +0.1 +0.0 +0.5
phage K20 +0.2 -0.3 -0.0 +0.1 +0.5
phage Bas55 -0.0 -0.2 +0.3 +0.1 +0.5
carbon source Sodium-DL-Lactate +0.0 -0.1 -0.3 +0.3 +0.7
phage Bas21 +0.3 -0.1 +0.1 -0.1 +0.7
phage Bas48 -0.0 -0.0 +0.1 +0.4 +0.5
phage Bas19 +0.2 -0.1 +0.3 +0.1 +0.7
phage RB23 +0.5 +0.2 +0.7 +0.2 -0.4
phage Phi92 +0.6 +0.7 +0.4 -0.1 -0.1
phage RB23 +0.6 +0.4 +0.7 +0.2 -0.1
phage TP7 +0.6 +0.5 +0.4 -0.0 +0.4
phage TP7 +0.6 +0.3 +0.5 +0.3 +0.6
phage Phi92 +0.8 +0.3 +1.3 +0.2 +0.3
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