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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
elaD and HEPCGN_22130 are separated by 190 nucleotides
HEPCGN_22130 and elaA are separated by 46 nucleotides
elaA and elaB are separated by 47 nucleotides
elaB and menF are separated by 78 nucleotides
HEPCGN_22125: elaD - ElaD/SseL family deubiquitinase, at 3,184,029 to 3,185,237
elaD
HEPCGN_22130: HEPCGN_22130 - ribonuclease BN, at 3,185,428 to 3,186,363
_22130
HEPCGN_22135: elaA - GNAT family N-acetyltransferase, at 3,186,410 to 3,186,877
elaA
HEPCGN_22140: elaB - stress response protein ElaB, at 3,186,925 to 3,187,230
elaB
HEPCGN_22145: menF - isochorismate synthase MenF, at 3,187,309 to 3,188,604
menF
Group
Condition
HEPCGN
_22125
HEPCGN
_22130
HEPCGN
_22135
HEPCGN
_22140
HEPCGN
_22145
elaD
elaA
elaB
menF
phage
TP7
-1.5
-0.1
+0.4
-1.0
+0.6
phage
TP7
-1.3
-0.0
+0.0
-0.1
+0.5
carbon source
Casamino-acids
-0.4
-0.2
-0.0
-0.1
-0.1
phage
RB23
-1.0
-0.1
+0.1
+0.0
+0.2
carbon source
Sodium-DL-Lactate
-0.5
-0.1
+0.2
-0.3
-0.0
phage
RB68
-0.7
+0.1
+0.1
+0.0
-0.2
phage
Bas48
-0.8
+0.1
-0.0
-0.3
+0.4
carbon source
Casamino-acids
-0.4
+0.0
+0.2
-0.2
-0.3
carbon source
D-Glucose
-0.5
+0.0
-0.0
+0.1
-0.1
carbon source
L-Arabinose
-0.4
-0.1
-0.1
-0.1
+0.2
no phage control
Control_ECOR38
-0.3
+0.1
-0.4
-0.1
+0.1
phage
K20
-0.6
+0.1
+0.1
-0.1
+0.1
phage
Phi92
-1.0
-0.2
+0.4
+0.2
+0.2
carbon source
L-Arabinose
-0.0
-0.1
+0.1
-0.0
-0.2
phage
Bas55
-0.2
+0.1
+0.1
-0.3
+0.1
phage
Bas48
-0.4
-0.2
+0.1
+0.0
+0.3
no phage control
Control_ECOR38
-0.7
+0.0
+0.1
+0.0
+0.3
phage
Bas38
+0.0
-0.1
+0.1
-0.1
-0.1
phage
Bas19
-0.5
+0.1
+0.2
-0.1
+0.2
phage
Bas55
-0.3
+0.1
-0.0
+0.0
+0.0
phage
Phi92
+0.3
-0.2
+0.3
-0.0
-0.5
phage
Bas39
+0.2
-0.0
-0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.2
+0.3
+0.1
-0.5
phage
Bas19
-0.6
+0.3
-0.0
+0.1
+0.2
phage
K20
-0.5
-0.1
+0.5
-0.1
+0.2
phage
RB23
-0.1
-0.1
-0.1
+0.2
+0.1
phage
Bas38
-0.1
+0.3
-0.1
-0.3
+0.2
phage
Bas39
+0.2
+0.2
-0.0
-0.2
+0.0
phage
Bas51
+0.5
-0.0
-0.0
-0.2
+0.1
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