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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
yfcG and yfcF are separated by 135 nucleotides
yfcF and yfcE are separated by 55 nucleotides
yfcE and yfcD are separated by 57 nucleotides
yfcD and yfcC are separated by 32 nucleotides
HEPCGN_21970: yfcG - GSH-dependent disulfide bond oxidoreductase, at 3,149,189 to 3,149,836
yfcG
HEPCGN_21975: yfcF - glutathione transferase, at 3,149,972 to 3,150,616
yfcF
HEPCGN_21980: yfcE - phosphodiesterase, at 3,150,672 to 3,151,223
yfcE
HEPCGN_21985: yfcD - NUDIX hydrolase YfcD, at 3,151,281 to 3,151,823
yfcD
HEPCGN_21990: yfcC - putative basic amino acid antiporter YfcC, at 3,151,856 to 3,153,334
yfcC
Group
Condition
HEPCGN
_21970
HEPCGN
_21975
HEPCGN
_21980
HEPCGN
_21985
HEPCGN
_21990
yfcG
yfcF
yfcE
yfcD
yfcC
phage
Bas39
-0.6
-0.1
-0.2
-0.6
-0.3
carbon source
D-Glucose
-0.2
-0.1
+0.1
-1.1
-0.2
phage
Bas55
-0.5
-0.3
+0.2
-0.7
-0.2
carbon source
Sodium-DL-Lactate
-0.2
-0.9
+0.3
-0.2
-0.2
phage
K20
+0.2
-0.6
-0.1
-0.5
-0.2
phage
Bas19
-0.4
-0.3
-0.3
-0.2
+0.0
phage
Phi92
+0.0
-0.5
+0.2
-0.7
-0.1
carbon source
Casamino-acids
-0.3
-0.1
+0.1
-0.6
-0.1
phage
Bas48
+0.2
-0.5
-0.1
-0.5
+0.0
phage
RB23
-0.4
-0.0
-0.3
-0.3
+0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.4
-0.1
-0.3
-0.1
phage
Phi92
-0.1
-0.7
+0.1
-0.0
+0.1
phage
Bas48
-0.0
+0.0
-0.1
-0.2
-0.1
phage
Bas38
-0.1
-0.2
-0.0
+0.1
-0.2
phage
TP7
-0.3
-0.5
+0.1
+0.3
+0.1
no phage control
Control_ECOR38
-0.2
-0.0
+0.1
+0.1
-0.2
phage
Bas39
-0.2
+0.1
+0.1
+0.0
-0.1
no phage control
Control_ECOR38
-0.1
-0.2
+0.2
+0.1
-0.1
phage
Bas19
+0.2
+0.1
+0.1
-0.6
+0.2
carbon source
L-Arabinose
+0.4
-0.1
+0.1
-0.2
-0.2
carbon source
L-Arabinose
-0.0
+0.3
-0.2
-0.1
+0.0
phage
Bas38
-0.1
+0.3
+0.0
+0.1
-0.1
phage
TP7
+0.2
+0.2
-0.2
+0.0
-0.1
phage
Bas51
+0.3
+0.4
+0.0
-0.4
-0.0
phage
RB23
+0.1
+0.0
+0.0
+0.2
+0.2
phage
Bas55
+0.7
+0.3
-0.1
-0.3
+0.0
carbon source
Casamino-acids
+0.3
+0.4
+0.1
-0.4
+0.2
phage
K20
-0.0
+0.4
+0.3
+0.0
+0.1
phage
RB68
+0.9
-0.2
-0.0
+0.5
+0.1
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