Fitness for 5 genes in Escherichia coli ECOR38

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500 ntaccD and folC are separated by 69 nucleotidesfolC and dedD overlap by 11 nucleotidesdedD and cvpA are separated by 329 nucleotidescvpA and purF are separated by 36 nucleotides HEPCGN_21885: accD - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 3,133,476 to 3,134,390 accD HEPCGN_21890: folC - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 3,134,460 to 3,135,728 folC HEPCGN_21895: dedD - cell division protein DedD, at 3,135,718 to 3,136,380 dedD HEPCGN_21905: cvpA - colicin V production protein, at 3,136,710 to 3,137,198 cvpA HEPCGN_21910: purF - amidophosphoribosyltransferase, at 3,137,235 to 3,138,752 purF
Group Condition HEPCGN_21885 HEPCGN_21890 HEPCGN_21895 HEPCGN_21905 HEPCGN_21910
accD folC dedD cvpA purF
carbon source Casamino-acids N.D. N.D. +0.2 -1.3 -4.4
carbon source Casamino-acids N.D. N.D. -0.1 -1.3 -4.0
carbon source Sodium-DL-Lactate N.D. N.D. +0.0 -0.4 -4.5
carbon source L-Arabinose N.D. N.D. -0.4 -0.7 -2.9
carbon source Sodium-DL-Lactate N.D. N.D. +0.0 -0.6 -3.3
carbon source L-Arabinose N.D. N.D. -0.0 -0.6 -3.2
carbon source D-Glucose N.D. N.D. -0.1 -0.6 -2.2
phage TP7 N.D. N.D. -0.5 -0.4 -0.2
phage Bas19 N.D. N.D. +0.0 -0.4 -0.0
phage RB23 N.D. N.D. -0.2 -0.0 -0.1
phage Bas48 N.D. N.D. -0.3 +0.1 -0.1
phage TP7 N.D. N.D. -0.4 +0.4 -0.1
phage Bas38 N.D. N.D. +0.1 -0.3 +0.1
phage K20 N.D. N.D. -0.1 +0.2 -0.1
phage Bas19 N.D. N.D. -0.0 +0.1 -0.1
phage RB68 N.D. N.D. -0.2 +0.2 -0.0
phage RB23 N.D. N.D. -0.1 -0.2 +0.3
no phage control Control_ECOR38 N.D. N.D. +0.1 -0.1 +0.0
phage Bas55 N.D. N.D. -0.0 +0.1 +0.0
phage Bas39 N.D. N.D. +0.3 -0.1 -0.1
phage Bas48 N.D. N.D. +0.1 +0.1 +0.0
phage Bas55 N.D. N.D. +0.0 +0.1 +0.1
phage Phi92 N.D. N.D. +0.1 -0.2 +0.3
phage K20 N.D. N.D. +0.0 +0.2 +0.1
phage Bas51 N.D. N.D. +0.1 +0.1 +0.1
phage Bas38 N.D. N.D. +0.2 +0.1 +0.2
phage Phi92 N.D. N.D. +0.4 +0.0 +0.1
phage Bas39 N.D. N.D. +0.3 -0.1 +0.2
no phage control Control_ECOR38 N.D. N.D. +0.3 +0.1 +0.1
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