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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
accD and folC are separated by 69 nucleotides
folC and dedD overlap by 11 nucleotides
dedD and cvpA are separated by 329 nucleotides
cvpA and purF are separated by 36 nucleotides
HEPCGN_21885: accD - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 3,133,476 to 3,134,390
accD
HEPCGN_21890: folC - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 3,134,460 to 3,135,728
folC
HEPCGN_21895: dedD - cell division protein DedD, at 3,135,718 to 3,136,380
dedD
HEPCGN_21905: cvpA - colicin V production protein, at 3,136,710 to 3,137,198
cvpA
HEPCGN_21910: purF - amidophosphoribosyltransferase, at 3,137,235 to 3,138,752
purF
Group
Condition
HEPCGN
_21885
HEPCGN
_21890
HEPCGN
_21895
HEPCGN
_21905
HEPCGN
_21910
accD
folC
dedD
cvpA
purF
carbon source
Casamino-acids
N.D.
N.D.
+0.2
-1.3
-4.4
carbon source
Casamino-acids
N.D.
N.D.
-0.1
-1.3
-4.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
-0.4
-4.5
carbon source
L-Arabinose
N.D.
N.D.
-0.4
-0.7
-2.9
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
-0.6
-3.3
carbon source
L-Arabinose
N.D.
N.D.
-0.0
-0.6
-3.2
carbon source
D-Glucose
N.D.
N.D.
-0.1
-0.6
-2.2
phage
TP7
N.D.
N.D.
-0.5
-0.4
-0.2
phage
Bas19
N.D.
N.D.
+0.0
-0.4
-0.0
phage
RB23
N.D.
N.D.
-0.2
-0.0
-0.1
phage
Bas48
N.D.
N.D.
-0.3
+0.1
-0.1
phage
TP7
N.D.
N.D.
-0.4
+0.4
-0.1
phage
Bas38
N.D.
N.D.
+0.1
-0.3
+0.1
phage
K20
N.D.
N.D.
-0.1
+0.2
-0.1
phage
Bas19
N.D.
N.D.
-0.0
+0.1
-0.1
phage
RB68
N.D.
N.D.
-0.2
+0.2
-0.0
phage
RB23
N.D.
N.D.
-0.1
-0.2
+0.3
no phage control
Control_ECOR38
N.D.
N.D.
+0.1
-0.1
+0.0
phage
Bas55
N.D.
N.D.
-0.0
+0.1
+0.0
phage
Bas39
N.D.
N.D.
+0.3
-0.1
-0.1
phage
Bas48
N.D.
N.D.
+0.1
+0.1
+0.0
phage
Bas55
N.D.
N.D.
+0.0
+0.1
+0.1
phage
Phi92
N.D.
N.D.
+0.1
-0.2
+0.3
phage
K20
N.D.
N.D.
+0.0
+0.2
+0.1
phage
Bas51
N.D.
N.D.
+0.1
+0.1
+0.1
phage
Bas38
N.D.
N.D.
+0.2
+0.1
+0.2
phage
Phi92
N.D.
N.D.
+0.4
+0.0
+0.1
phage
Bas39
N.D.
N.D.
+0.3
-0.1
+0.2
no phage control
Control_ECOR38
N.D.
N.D.
+0.3
+0.1
+0.1
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