Fitness for 5 genes in Escherichia coli ECOR38

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500 ntsmrB and prmB are separated by 165 nucleotidesprmB and aroC are separated by 34 nucleotidesaroC and mepA are separated by 2 nucleotidesmepA and yfcA overlap by 1 nucleotides HEPCGN_21810: smrB - endonuclease SmrB, at 3,118,311 to 3,118,862 smrB HEPCGN_21815: prmB - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 3,119,028 to 3,119,960 prmB HEPCGN_21820: aroC - chorismate synthase, at 3,119,995 to 3,121,080 aroC HEPCGN_21825: mepA - penicillin-insensitive murein endopeptidase, at 3,121,083 to 3,121,907 mepA HEPCGN_21830: yfcA - putative membrane transporter protein YfcA, at 3,121,907 to 3,122,716 yfcA
Group Condition HEPCGN_21810 HEPCGN_21815 HEPCGN_21820 HEPCGN_21825 HEPCGN_21830
smrB prmB aroC mepA yfcA
carbon source L-Arabinose -0.1 -0.8 -7.7 -0.1 +0.1
carbon source Sodium-DL-Lactate -0.0 -0.1 -8.0 -0.2 +0.1
carbon source Sodium-DL-Lactate -0.2 -0.0 -7.7 -0.1 +0.1
carbon source D-Glucose -0.1 -0.5 -5.7 -0.2 -0.1
carbon source L-Arabinose +0.3 -0.5 -5.4 -0.1 -0.2
phage TP7 -0.5 -3.3 -1.4 -0.1 -0.3
phage Bas19 -0.1 -0.8 -1.5 -0.2 -0.4
phage RB23 +0.1 -1.3 -1.0 -0.4 -0.2
phage TP7 +0.3 -2.5 -0.4 -0.1 +0.1
phage Bas48 +0.4 -1.1 -1.2 +0.0 -0.1
phage RB23 +0.0 -0.8 -0.7 -0.3 -0.1
carbon source Casamino-acids +0.2 +0.0 -2.0 -0.1 +0.1
phage Bas19 +0.1 -0.9 -0.2 -0.2 -0.1
phage Bas55 +0.2 -0.4 -0.9 +0.2 -0.2
phage K20 -0.0 -0.0 -0.5 -0.1 -0.3
carbon source Casamino-acids +0.2 -0.2 -0.9 -0.1 +0.1
phage Bas48 +0.1 -1.0 +0.0 +0.3 -0.2
phage Bas55 -0.2 -0.3 -0.4 +0.0 +0.2
phage Bas39 +0.1 +0.0 -0.2 -0.1 -0.4
no phage control Control_ECOR38 +0.0 -0.2 -0.3 +0.1 -0.0
phage K20 +0.2 -0.1 +0.2 -0.3 -0.1
phage Bas51 +0.2 -0.0 +0.1 +0.1 -0.4
phage Bas38 -0.1 +0.1 -0.1 +0.0 -0.0
phage RB68 +0.0 +0.1 -0.3 +0.0 +0.1
phage Bas38 +0.1 -0.1 -0.2 +0.1 -0.0
no phage control Control_ECOR38 -0.1 +0.0 +0.2 +0.1 -0.1
phage Bas39 +0.2 +0.0 -0.0 +0.1 +0.0
phage Phi92 +0.0 +1.1 +1.1 -0.2 -0.4
phage Phi92 +0.1 +0.8 +1.6 +0.0 -0.6
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