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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
eutL and eutK are separated by 12 nucleotides
eutK and eutR are separated by 45 nucleotides
eutR and hemF are separated by 5 nucleotides
hemF and amiA are separated by 0 nucleotides
HEPCGN_21255: eutL - ethanolamine utilization microcompartment protein EutL, at 3,005,525 to 3,006,184
eutL
HEPCGN_21260: eutK - ethanolamine utilization microcompartment protein EutK, at 3,006,197 to 3,006,697
eutK
HEPCGN_21265: eutR - HTH-type transcriptional regulator EutR, at 3,006,743 to 3,007,795
eutR
HEPCGN_21270: hemF - oxygen-dependent coproporphyrinogen oxidase, at 3,007,801 to 3,008,703
hemF
HEPCGN_21275: amiA - N-acetylmuramoyl-L-alanine amidase AmiA, at 3,008,704 to 3,009,573
amiA
Group
Condition
HEPCGN
_21255
HEPCGN
_21260
HEPCGN
_21265
HEPCGN
_21270
HEPCGN
_21275
eutL
eutK
eutR
hemF
amiA
phage
TP7
+0.4
-0.1
+0.0
+0.1
-5.5
phage
Bas19
+0.1
-0.1
-0.0
-0.2
-4.7
phage
TP7
+0.1
+0.6
+0.0
-0.2
-5.2
phage
RB23
+0.0
-0.2
-0.1
+0.0
-4.4
phage
Bas19
+0.0
-0.1
+0.1
-0.4
-4.1
phage
RB23
-0.0
+0.3
-0.0
+0.0
-4.7
phage
Bas48
-0.1
-0.1
-0.1
+0.1
-3.7
phage
Bas48
+0.1
+0.3
-0.1
-0.0
-1.8
phage
Bas38
-0.2
-0.2
+0.0
-0.3
-0.7
phage
Bas39
-0.2
+0.0
+0.1
-0.0
-1.2
phage
Bas55
-0.0
+0.0
+0.0
-0.0
-1.2
phage
RB68
-0.0
-0.3
-0.0
+0.0
-0.6
no phage control
Control_ECOR38
-0.1
-0.2
+0.1
+0.0
-0.6
carbon source
Casamino-acids
-0.2
-0.2
-0.2
-0.0
-0.1
carbon source
D-Glucose
-0.1
-0.6
-0.0
+0.2
-0.2
phage
Bas51
-0.0
-0.2
+0.2
-0.0
-0.7
phage
K20
-0.0
-0.0
+0.0
-0.2
-0.5
phage
K20
-0.1
+0.3
+0.0
-0.3
-0.6
phage
Bas55
+0.0
+0.3
-0.0
-0.4
-0.4
phage
Bas38
-0.1
+0.0
+0.0
+0.1
-0.6
carbon source
L-Arabinose
+0.2
-0.1
+0.1
+0.2
-0.9
phage
Bas39
-0.1
-0.2
-0.0
-0.1
-0.1
no phage control
Control_ECOR38
-0.1
-0.1
+0.0
-0.5
+0.4
carbon source
Casamino-acids
+0.2
-0.1
+0.1
+0.3
-0.1
carbon source
Sodium-DL-Lactate
+0.0
-0.3
+0.1
+0.3
+0.3
carbon source
Sodium-DL-Lactate
+0.2
+0.2
-0.0
+0.1
+0.1
carbon source
L-Arabinose
+0.1
+0.0
+0.2
+0.2
+0.1
phage
Phi92
+0.1
-0.1
-0.2
-0.5
+3.3
phage
Phi92
+0.1
-0.1
-0.1
+0.0
+3.5
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