Fitness for 5 genes in Escherichia coli ECOR38

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500 ntccmA and yphD are separated by 24 nucleotidesyphD and yphC are separated by 65 nucleotidesyphC and yphB are separated by 11 nucleotidesyphB and doxX are separated by 47 nucleotides HEPCGN_20675: ccmA - heme ABC exporter ATP-binding protein CcmA, at 2,875,886 to 2,877,397 ccmA HEPCGN_20680: yphD - putative ABC transporter permease protein YphD, at 2,877,422 to 2,878,420 yphD HEPCGN_20685: yphC - Uncharacterized zinc-type alcohol dehydrogenase-like protein YphC, at 2,878,486 to 2,879,547 yphC HEPCGN_20690: yphB - Uncharacterized protein YphB, at 2,879,559 to 2,880,431 yphB HEPCGN_20695: doxX - DoxX, at 2,880,479 to 2,880,901 doxX
Group Condition HEPCGN_20675 HEPCGN_20680 HEPCGN_20685 HEPCGN_20690 HEPCGN_20695
ccmA yphD yphC yphB doxX
phage Phi92 -0.1 -0.2 +0.1 -0.7 -0.6
phage Bas48 -0.5 -0.3 +0.2 +0.0 -0.1
carbon source D-Glucose -0.2 -0.2 -0.1 -0.2 -0.0
phage Bas48 -0.0 -0.6 +0.3 -0.4 +0.2
phage Bas55 +0.0 -0.4 +0.1 -0.4 +0.0
phage K20 -0.1 -0.2 +0.2 -0.3 +0.0
phage Bas19 -0.3 +0.1 -0.1 -0.4 +0.2
phage Bas19 -0.1 -0.4 +0.0 -0.1 +0.1
phage Bas39 +0.1 -0.1 -0.1 -0.3 +0.1
carbon source Sodium-DL-Lactate -0.0 -0.0 -0.0 -0.3 +0.0
phage Bas55 +0.0 +0.0 +0.0 -0.0 -0.3
phage K20 -0.0 -0.2 +0.2 -0.1 -0.1
phage Phi92 +0.1 +0.4 -0.1 -0.3 -0.2
phage RB23 -0.1 -0.1 -0.1 -0.3 +0.4
carbon source Casamino-acids +0.1 -0.2 +0.1 -0.0 -0.0
phage Bas38 -0.0 -0.3 -0.1 +0.1 +0.1
carbon source Sodium-DL-Lactate +0.2 -0.1 -0.1 -0.1 -0.0
phage RB68 -0.0 -0.1 +0.2 -0.1 +0.2
phage RB23 +0.1 +0.0 +0.0 -0.1 +0.1
phage Bas38 +0.1 -0.0 +0.0 +0.1 -0.0
carbon source Casamino-acids +0.2 +0.1 -0.1 +0.1 +0.1
carbon source L-Arabinose -0.1 +0.1 +0.1 +0.2 -0.0
no phage control Control_ECOR38 -0.0 +0.4 -0.1 +0.1 +0.0
phage Bas39 +0.2 -0.0 +0.1 +0.2 +0.1
no phage control Control_ECOR38 +0.1 +0.3 +0.0 +0.3 -0.0
phage TP7 +0.5 +0.5 -0.0 -0.2 -0.1
phage TP7 +0.1 -0.1 +0.4 +0.3 +0.1
carbon source L-Arabinose +0.3 +0.6 +0.1 -0.1 +0.2
phage Bas51 +0.2 +0.3 +0.1 +0.4 +0.3
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