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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
ccmA and yphD are separated by 24 nucleotides
yphD and yphC are separated by 65 nucleotides
yphC and yphB are separated by 11 nucleotides
yphB and doxX are separated by 47 nucleotides
HEPCGN_20675: ccmA - heme ABC exporter ATP-binding protein CcmA, at 2,875,886 to 2,877,397
ccmA
HEPCGN_20680: yphD - putative ABC transporter permease protein YphD, at 2,877,422 to 2,878,420
yphD
HEPCGN_20685: yphC - Uncharacterized zinc-type alcohol dehydrogenase-like protein YphC, at 2,878,486 to 2,879,547
yphC
HEPCGN_20690: yphB - Uncharacterized protein YphB, at 2,879,559 to 2,880,431
yphB
HEPCGN_20695: doxX - DoxX, at 2,880,479 to 2,880,901
doxX
Group
Condition
HEPCGN
_20675
HEPCGN
_20680
HEPCGN
_20685
HEPCGN
_20690
HEPCGN
_20695
ccmA
yphD
yphC
yphB
doxX
phage
Phi92
-0.1
-0.2
+0.1
-0.7
-0.6
phage
Bas48
-0.5
-0.3
+0.2
+0.0
-0.1
carbon source
D-Glucose
-0.2
-0.2
-0.1
-0.2
-0.0
phage
Bas48
-0.0
-0.6
+0.3
-0.4
+0.2
phage
Bas55
+0.0
-0.4
+0.1
-0.4
+0.0
phage
K20
-0.1
-0.2
+0.2
-0.3
+0.0
phage
Bas19
-0.3
+0.1
-0.1
-0.4
+0.2
phage
Bas19
-0.1
-0.4
+0.0
-0.1
+0.1
phage
Bas39
+0.1
-0.1
-0.1
-0.3
+0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.0
-0.3
+0.0
phage
Bas55
+0.0
+0.0
+0.0
-0.0
-0.3
phage
K20
-0.0
-0.2
+0.2
-0.1
-0.1
phage
Phi92
+0.1
+0.4
-0.1
-0.3
-0.2
phage
RB23
-0.1
-0.1
-0.1
-0.3
+0.4
carbon source
Casamino-acids
+0.1
-0.2
+0.1
-0.0
-0.0
phage
Bas38
-0.0
-0.3
-0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.1
-0.1
-0.1
-0.0
phage
RB68
-0.0
-0.1
+0.2
-0.1
+0.2
phage
RB23
+0.1
+0.0
+0.0
-0.1
+0.1
phage
Bas38
+0.1
-0.0
+0.0
+0.1
-0.0
carbon source
Casamino-acids
+0.2
+0.1
-0.1
+0.1
+0.1
carbon source
L-Arabinose
-0.1
+0.1
+0.1
+0.2
-0.0
no phage control
Control_ECOR38
-0.0
+0.4
-0.1
+0.1
+0.0
phage
Bas39
+0.2
-0.0
+0.1
+0.2
+0.1
no phage control
Control_ECOR38
+0.1
+0.3
+0.0
+0.3
-0.0
phage
TP7
+0.5
+0.5
-0.0
-0.2
-0.1
phage
TP7
+0.1
-0.1
+0.4
+0.3
+0.1
carbon source
L-Arabinose
+0.3
+0.6
+0.1
-0.1
+0.2
phage
Bas51
+0.2
+0.3
+0.1
+0.4
+0.3
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