Fitness for 5 genes in Escherichia coli ECOR38

Add gene:

Number of genes on each side:  

Top 29 experiments (either direction), sorted by average fitness

Or view all 29 experiments or choose conditions or try the comparative fitness browser

500 nttnp-IS3 and srmB are separated by 189 nucleotidessrmB and trmN are separated by 131 nucleotidestrmN and nadB overlap by 16 nucleotidesnadB and rpoE are separated by 407 nucleotides HEPCGN_20495: tnp-IS3 - IS3 family transposase, at 2,839,402 to 2,839,923 tnp-IS3 HEPCGN_20505: srmB - ATP-dependent RNA helicase SrmB, at 2,840,113 to 2,841,447 srmB HEPCGN_20510: trmN - tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN, at 2,841,579 to 2,842,316 trmN HEPCGN_20515: nadB - L-aspartate oxidase, at 2,842,301 to 2,843,923 nadB HEPCGN_20520: rpoE - RNA polymerase sigma factor RpoE, at 2,844,331 to 2,844,906 rpoE
Group Condition HEPCGN_20495 HEPCGN_20505 HEPCGN_20510 HEPCGN_20515 HEPCGN_20520
tnp-IS3 srmB trmN nadB rpoE
carbon source Casamino-acids N.D. -1.2 +0.1 -2.1 N.D.
carbon source Casamino-acids N.D. -1.2 -0.0 -1.7 N.D.
carbon source L-Arabinose N.D. -0.5 -0.3 -0.7 N.D.
carbon source D-Glucose N.D. -0.9 +0.1 -0.8 N.D.
carbon source Sodium-DL-Lactate N.D. -1.1 +0.1 -0.6 N.D.
carbon source Sodium-DL-Lactate N.D. -1.0 +0.1 -0.6 N.D.
phage Bas38 N.D. -1.2 -0.0 -0.1 N.D.
no phage control Control_ECOR38 N.D. -0.8 -0.3 -0.1 N.D.
no phage control Control_ECOR38 N.D. -1.2 -0.1 +0.1 N.D.
phage Bas39 N.D. -0.9 -0.1 -0.0 N.D.
carbon source L-Arabinose N.D. -0.4 -0.0 -0.6 N.D.
phage Bas55 N.D. -0.5 -0.3 -0.2 N.D.
phage Bas51 N.D. -0.9 -0.1 +0.0 N.D.
phage Bas38 N.D. -0.8 +0.1 -0.2 N.D.
phage Bas39 N.D. -0.8 -0.0 -0.0 N.D.
phage Bas55 N.D. -0.5 -0.2 +0.0 N.D.
phage RB68 N.D. -0.7 +0.1 +0.0 N.D.
phage K20 N.D. -0.8 +0.1 +0.1 N.D.
phage K20 N.D. -0.7 +0.1 +0.0 N.D.
phage Bas19 N.D. -0.6 +0.1 +0.1 N.D.
phage Bas19 N.D. -0.2 -0.2 +0.0 N.D.
phage Bas48 N.D. +0.4 -0.2 -0.2 N.D.
phage RB23 N.D. +0.2 -0.2 +0.1 N.D.
phage RB23 N.D. +0.5 -0.3 +0.0 N.D.
phage Bas48 N.D. +0.3 +0.1 +0.1 N.D.
phage Phi92 N.D. +2.0 -0.4 -0.3 N.D.
phage Phi92 N.D. +2.1 -0.2 -0.1 N.D.
phage TP7 N.D. +2.3 -0.2 -0.2 N.D.
phage TP7 N.D. +2.2 -0.1 -0.1 N.D.
remove
HEPCGN_20495
plot		 remove
HEPCGN_20505
plot		 remove
HEPCGN_20510		 remove
HEPCGN_20515
plot		 remove
HEPCGN_20520
plot