Fitness for 5 genes in Escherichia coli ECOR38

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500 ntyfjD and ypjD are separated by 65 nucleotidesypjD and ffh are separated by 91 nucleotidesffh and rpsP are separated by 136 nucleotidesrpsP and rimM are separated by 18 nucleotides HEPCGN_20280: yfjD - UPF0053 inner membrane protein YfjD, at 2,801,560 to 2,802,801 yfjD HEPCGN_20285: ypjD - Inner membrane protein YpjD, at 2,802,867 to 2,803,733 ypjD HEPCGN_20290: ffh - signal recognition particle protein, at 2,803,825 to 2,805,186 ffh HEPCGN_20295: rpsP - 30S ribosomal protein S16, at 2,805,323 to 2,805,571 rpsP HEPCGN_20300: rimM - ribosome maturation factor RimM, at 2,805,590 to 2,806,138 rimM
Group Condition HEPCGN_20280 HEPCGN_20285 HEPCGN_20290 HEPCGN_20295 HEPCGN_20300
yfjD ypjD ffh rpsP rimM
phage TP7 +0.4 -0.9 N.D. N.D. N.D.
phage RB23 -0.0 -0.4 N.D. N.D. N.D.
carbon source L-Arabinose -0.2 -0.3 N.D. N.D. N.D.
carbon source Casamino-acids -0.3 -0.1 N.D. N.D. N.D.
carbon source Casamino-acids -0.1 -0.1 N.D. N.D. N.D.
phage Bas38 +0.1 -0.3 N.D. N.D. N.D.
phage Bas19 -0.1 -0.2 N.D. N.D. N.D.
no phage control Control_ECOR38 -0.1 -0.1 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate -0.2 +0.0 N.D. N.D. N.D.
carbon source D-Glucose -0.1 -0.1 N.D. N.D. N.D.
phage TP7 +0.1 -0.3 N.D. N.D. N.D.
phage Bas19 +0.0 -0.1 N.D. N.D. N.D.
phage RB23 +0.0 -0.1 N.D. N.D. N.D.
phage K20 -0.0 -0.1 N.D. N.D. N.D.
phage Bas38 -0.0 -0.0 N.D. N.D. N.D.
phage Bas55 -0.0 +0.0 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate +0.3 -0.2 N.D. N.D. N.D.
phage K20 -0.1 +0.1 N.D. N.D. N.D.
phage Bas55 +0.1 -0.1 N.D. N.D. N.D.
phage Bas48 +0.2 -0.2 N.D. N.D. N.D.
no phage control Control_ECOR38 +0.1 -0.0 N.D. N.D. N.D.
carbon source L-Arabinose +0.1 -0.0 N.D. N.D. N.D.
phage Bas51 +0.2 -0.1 N.D. N.D. N.D.
phage Bas39 +0.1 +0.0 N.D. N.D. N.D.
phage Bas48 +0.1 +0.0 N.D. N.D. N.D.
phage RB68 +0.1 +0.1 N.D. N.D. N.D.
phage Bas39 +0.1 +0.2 N.D. N.D. N.D.
phage Phi92 -0.0 +0.4 N.D. N.D. N.D.
phage Phi92 +0.3 +0.7 N.D. N.D. N.D.
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