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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ecdB and ubiD overlap by 1 nucleotides
ubiD and ecdD are separated by 10 nucleotides
ecdD and pphB are separated by 41 nucleotides
pphB and mutS are separated by 105 nucleotides
HEPCGN_19685: ecdB - putative UbiX-like flavin prenyltransferase, at 2,692,965 to 2,693,558
ecdB
HEPCGN_19690: ubiD - phenolic acid decarboxylase, at 2,693,558 to 2,694,985
ubiD
HEPCGN_19695: ecdD - Protein EcdD, at 2,694,996 to 2,695,232
ecdD
HEPCGN_19700: pphB - protein-serine/threonine phosphatase, at 2,695,274 to 2,695,930
pphB
HEPCGN_19705: mutS - DNA mismatch repair protein MutS, at 2,696,036 to 2,698,597
mutS
Group
Condition
HEPCGN
_19685
HEPCGN
_19690
HEPCGN
_19695
HEPCGN
_19700
HEPCGN
_19705
ecdB
ubiD
ecdD
pphB
mutS
phage
TP7
+0.1
-0.4
-0.8
-3.7
+0.0
phage
Bas55
-0.7
-0.1
-0.2
-0.4
-0.1
carbon source
Casamino-acids
+0.2
-0.1
+0.1
-1.4
+0.0
phage
Bas19
+0.1
+0.3
-0.7
-0.5
-0.2
phage
Bas48
-0.1
-0.3
-0.4
-0.2
-0.1
phage
K20
+0.3
+0.2
-0.5
-0.9
-0.1
phage
Bas38
+0.2
-0.1
-0.3
-0.6
-0.1
phage
K20
+0.0
-0.7
-0.0
-0.1
+0.0
carbon source
L-Arabinose
+0.1
+0.0
-0.3
-0.6
+0.0
phage
Bas48
+0.2
+0.1
-0.7
-0.3
-0.0
phage
Bas55
-0.3
-0.4
-0.2
+0.2
-0.0
carbon source
D-Glucose
-0.3
-0.1
+0.1
-0.3
-0.1
phage
Bas19
+0.2
-0.0
-0.1
-0.5
-0.0
phage
RB68
-0.3
+0.3
-0.1
-0.3
+0.0
carbon source
Sodium-DL-Lactate
-0.2
-0.2
+0.2
-0.0
-0.2
phage
Bas38
-0.3
+0.2
-0.1
+0.0
-0.1
no phage control
Control_ECOR38
+0.3
+0.1
+0.1
-0.6
-0.1
phage
RB23
+0.2
-0.3
-0.2
+0.2
-0.1
phage
Bas51
-0.2
+0.3
-0.2
+0.1
+0.0
phage
Bas39
+0.2
-0.3
-0.1
+0.2
-0.1
phage
Bas39
-0.0
+0.1
+0.0
-0.1
+0.0
phage
Phi92
-0.1
+0.1
-0.5
-0.5
+1.1
phage
Phi92
-0.2
+0.1
-0.1
-0.7
+0.9
no phage control
Control_ECOR38
+0.2
+0.1
-0.1
-0.0
-0.1
phage
RB23
-0.0
+0.1
-0.5
+0.5
+0.1
phage
TP7
+0.2
-0.1
+0.0
-0.1
+0.2
carbon source
Casamino-acids
+0.1
+0.2
-0.2
+0.3
-0.0
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.4
+0.3
-0.1
carbon source
L-Arabinose
+0.1
+0.7
-0.0
+0.4
-0.1
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