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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
ygcG and HEPCGN_19230 are separated by 45 nucleotides
HEPCGN_19230 and ygdR are separated by 107 nucleotides
ygdR and ygdQ are separated by 137 nucleotides
ygdQ and mutH are separated by 68 nucleotides
HEPCGN_19225: ygcG - UPF0603 protein YgcG, at 2,596,569 to 2,597,441
ygcG
HEPCGN_19230: HEPCGN_19230 - IS4-like element IS4 family transposase, at 2,597,487 to 2,598,815
_19230
HEPCGN_19235: ygdR - lipoprotein YgdR, at 2,598,923 to 2,599,141
ygdR
HEPCGN_19240: ygdQ - UPF0053 inner membrane protein YgdQ, at 2,599,279 to 2,599,992
ygdQ
HEPCGN_19245: mutH - DNA mismatch repair endonuclease MutH, at 2,600,061 to 2,600,750
mutH
Group
Condition
HEPCGN
_19225
HEPCGN
_19230
HEPCGN
_19235
HEPCGN
_19240
HEPCGN
_19245
ygcG
ygdR
ygdQ
mutH
phage
Bas19
-0.2
N.D.
-0.3
-0.3
-0.1
phage
Bas55
+0.0
N.D.
-0.4
-0.2
-0.3
carbon source
Sodium-DL-Lactate
-0.2
N.D.
-0.6
+0.1
-0.1
carbon source
L-Arabinose
-0.2
N.D.
-0.5
-0.3
+0.1
phage
Bas51
+0.1
N.D.
-0.6
-0.0
-0.1
phage
Bas38
-0.0
N.D.
-0.3
-0.0
-0.1
carbon source
D-Glucose
-0.0
N.D.
-0.8
+0.4
-0.1
phage
Bas38
-0.1
N.D.
-0.2
-0.1
-0.1
phage
K20
+0.3
N.D.
-0.4
-0.2
+0.0
phage
Bas39
-0.0
N.D.
-0.0
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.2
N.D.
-0.1
-0.0
-0.1
phage
Bas19
+0.2
N.D.
-0.2
-0.1
-0.2
phage
K20
+0.0
N.D.
+0.1
-0.3
-0.1
no phage control
Control_ECOR38
-0.3
N.D.
+0.0
-0.1
+0.1
phage
TP7
-0.0
N.D.
-0.6
-0.3
+0.7
phage
Bas39
-0.0
N.D.
-0.2
-0.0
+0.0
phage
Bas55
+0.2
N.D.
-0.1
-0.1
-0.2
phage
RB23
-0.2
N.D.
+0.4
-0.3
-0.1
phage
Bas48
+0.3
N.D.
-0.6
+0.0
+0.2
phage
RB68
-0.0
N.D.
+0.2
-0.3
+0.1
carbon source
Casamino-acids
-0.1
N.D.
+0.2
+0.1
-0.0
carbon source
L-Arabinose
-0.2
N.D.
+0.3
+0.3
-0.2
carbon source
Casamino-acids
+0.1
N.D.
-0.1
+0.3
-0.1
no phage control
Control_ECOR38
-0.1
N.D.
+0.1
+0.1
+0.1
phage
Bas48
+0.3
N.D.
+0.2
-0.3
+0.1
phage
RB23
+0.0
N.D.
+0.9
-0.0
-0.2
phage
TP7
+0.3
N.D.
+0.5
+0.1
+0.1
phage
Phi92
+0.0
N.D.
+0.3
+0.1
+0.8
phage
Phi92
+0.0
N.D.
+0.5
+0.1
+1.4
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