Fitness for 5 genes in Escherichia coli ECOR38

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500 ntspeA and HEPCGN_18615 are separated by 145 nucleotidesHEPCGN_18615 and speB are separated by 135 nucleotidesspeB and loiP are separated by 47 nucleotidesloiP and tkt are separated by 277 nucleotides HEPCGN_18610: speA - biosynthetic arginine decarboxylase, at 2,465,631 to 2,467,607 speA HEPCGN_18615: HEPCGN_18615 - Lipoprotein, at 2,467,753 to 2,468,484 _18615 HEPCGN_18620: speB - agmatinase, at 2,468,620 to 2,469,540 speB HEPCGN_18625: loiP - metalloprotease LoiP, at 2,469,588 to 2,470,346 loiP HEPCGN_18630: tkt - transketolase, at 2,470,624 to 2,472,615 tkt
Group Condition HEPCGN_18610 HEPCGN_18615 HEPCGN_18620 HEPCGN_18625 HEPCGN_18630
speA speB loiP tkt
phage TP7 -3.5 -0.1 -3.0 -0.3 -2.1
phage TP7 -4.3 +0.1 -2.1 -0.3 -1.8
phage RB23 -2.5 -0.1 -1.6 +0.1 -2.1
phage Bas19 -2.3 -0.0 -1.5 +0.0 -1.9
phage Bas19 -2.5 +0.0 -1.1 +0.1 -1.8
phage RB23 -1.8 +0.0 -1.1 +0.2 -1.2
phage Bas48 -1.6 +0.1 -1.3 -0.0 -1.0
carbon source Casamino-acids -0.8 +0.0 -1.1 -0.1 -0.9
carbon source Casamino-acids -0.7 -0.1 -1.7 +0.2 -0.3
no phage control Control_ECOR38 -0.2 -0.0 -0.6 -0.1 -1.6
phage Bas55 -0.5 +0.0 -0.7 -0.3 -1.0
phage Bas55 -0.5 -0.2 -0.5 -0.2 -1.1
phage Bas48 -1.4 +0.1 -0.6 -0.2 -0.3
phage K20 -0.1 +0.1 -0.9 +0.1 -1.5
carbon source L-Arabinose +0.1 +0.1 +0.1 +0.2 -2.7
carbon source L-Arabinose +0.0 +0.2 +0.1 -0.0 -2.6
phage Bas51 -0.3 -0.0 -0.5 -0.1 -1.2
phage RB68 -0.1 +0.1 -0.7 +0.0 -1.3
phage Bas38 -0.1 -0.1 -0.2 -0.1 -1.4
phage K20 -0.0 -0.1 -0.6 -0.1 -1.0
phage Bas39 -0.2 +0.0 -0.8 +0.1 -0.8
no phage control Control_ECOR38 -0.1 +0.1 -0.2 +0.2 -1.2
phage Bas39 -0.1 +0.2 -0.1 +0.1 -1.1
carbon source D-Glucose +0.2 -0.3 -0.1 +0.2 -1.0
phage Bas38 -0.2 +0.2 -0.3 +0.1 -0.8
carbon source Sodium-DL-Lactate +0.2 -0.0 +0.2 -0.2 -0.7
carbon source Sodium-DL-Lactate +0.1 +0.0 +0.4 -0.0 +0.1
phage Phi92 +3.0 +0.2 +2.0 -0.4 +1.1
phage Phi92 +3.0 +0.3 +2.6 -0.2 +0.9
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