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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
speA and HEPCGN_18615 are separated by 145 nucleotides
HEPCGN_18615 and speB are separated by 135 nucleotides
speB and loiP are separated by 47 nucleotides
loiP and tkt are separated by 277 nucleotides
HEPCGN_18610: speA - biosynthetic arginine decarboxylase, at 2,465,631 to 2,467,607
speA
HEPCGN_18615: HEPCGN_18615 - Lipoprotein, at 2,467,753 to 2,468,484
_18615
HEPCGN_18620: speB - agmatinase, at 2,468,620 to 2,469,540
speB
HEPCGN_18625: loiP - metalloprotease LoiP, at 2,469,588 to 2,470,346
loiP
HEPCGN_18630: tkt - transketolase, at 2,470,624 to 2,472,615
tkt
Group
Condition
HEPCGN
_18610
HEPCGN
_18615
HEPCGN
_18620
HEPCGN
_18625
HEPCGN
_18630
speA
speB
loiP
tkt
phage
TP7
-3.5
-0.1
-3.0
-0.3
-2.1
phage
TP7
-4.3
+0.1
-2.1
-0.3
-1.8
phage
RB23
-2.5
-0.1
-1.6
+0.1
-2.1
phage
Bas19
-2.3
-0.0
-1.5
+0.0
-1.9
phage
Bas19
-2.5
+0.0
-1.1
+0.1
-1.8
phage
RB23
-1.8
+0.0
-1.1
+0.2
-1.2
phage
Bas48
-1.6
+0.1
-1.3
-0.0
-1.0
carbon source
Casamino-acids
-0.8
+0.0
-1.1
-0.1
-0.9
carbon source
Casamino-acids
-0.7
-0.1
-1.7
+0.2
-0.3
no phage control
Control_ECOR38
-0.2
-0.0
-0.6
-0.1
-1.6
phage
Bas55
-0.5
+0.0
-0.7
-0.3
-1.0
phage
Bas55
-0.5
-0.2
-0.5
-0.2
-1.1
phage
Bas48
-1.4
+0.1
-0.6
-0.2
-0.3
phage
K20
-0.1
+0.1
-0.9
+0.1
-1.5
carbon source
L-Arabinose
+0.1
+0.1
+0.1
+0.2
-2.7
carbon source
L-Arabinose
+0.0
+0.2
+0.1
-0.0
-2.6
phage
Bas51
-0.3
-0.0
-0.5
-0.1
-1.2
phage
RB68
-0.1
+0.1
-0.7
+0.0
-1.3
phage
Bas38
-0.1
-0.1
-0.2
-0.1
-1.4
phage
K20
-0.0
-0.1
-0.6
-0.1
-1.0
phage
Bas39
-0.2
+0.0
-0.8
+0.1
-0.8
no phage control
Control_ECOR38
-0.1
+0.1
-0.2
+0.2
-1.2
phage
Bas39
-0.1
+0.2
-0.1
+0.1
-1.1
carbon source
D-Glucose
+0.2
-0.3
-0.1
+0.2
-1.0
phage
Bas38
-0.2
+0.2
-0.3
+0.1
-0.8
carbon source
Sodium-DL-Lactate
+0.2
-0.0
+0.2
-0.2
-0.7
carbon source
Sodium-DL-Lactate
+0.1
+0.0
+0.4
-0.0
+0.1
phage
Phi92
+3.0
+0.2
+2.0
-0.4
+1.1
phage
Phi92
+3.0
+0.3
+2.6
-0.2
+0.9
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