Fitness for 5 genes in Escherichia coli ECOR38

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500 ntgspL and yghD are separated by 1 nucleotidesyghD and kpsM are separated by 1058 nucleotideskpsM and kpsT overlap by 4 nucleotideskpsT and neuD are separated by 49 nucleotides HEPCGN_18090: gspL - general secretion pathway protein L, at 2,366,676 to 2,367,854 gspL HEPCGN_18095: yghD - GspM family type II secretion system protein YghD, at 2,367,856 to 2,368,392 yghD HEPCGN_18100: kpsM - Polysialic acid transport protein, at 2,369,451 to 2,370,227 kpsM HEPCGN_18105: kpsT - Polysialic acid transport ATP-binding protein, at 2,370,224 to 2,370,883 kpsT HEPCGN_18110: neuD - NeuD protein involved in sialic acid synthesis, at 2,370,933 to 2,371,556 neuD
Group Condition HEPCGN_18090 HEPCGN_18095 HEPCGN_18100 HEPCGN_18105 HEPCGN_18110
gspL yghD kpsM kpsT neuD
phage RB23 -0.2 -0.2 -4.0 -5.4 -6.6
phage Bas19 -0.2 -0.3 -3.8 -5.2 -6.4
phage RB23 +0.1 -0.5 -3.7 -5.1 -6.3
phage Bas19 +0.1 +0.1 -3.8 -5.1 -6.3
phage TP7 +0.1 -0.2 -3.2 -5.1 -6.4
phage TP7 +0.2 +0.5 -3.2 -4.9 -6.1
phage K20 +0.0 -0.2 -2.9 -5.3 -4.8
phage RB68 -0.0 -0.1 -3.5 -5.5 -4.1
phage K20 -0.1 +0.2 -3.9 -5.3 -3.7
phage Bas51 +0.1 -0.1 -1.1 -0.9 -0.4
phage Bas39 -0.3 -0.5 -0.3 -0.0 -0.0
no phage control Control_ECOR38 +0.0 -0.0 -0.2 -0.3 -0.2
phage Bas38 -0.0 +0.0 -0.3 +0.1 +0.1
phage Bas39 -0.2 -0.3 -0.4 +0.5 +0.4
no phage control Control_ECOR38 +0.2 -0.2 -0.5 -0.2 +0.7
carbon source Casamino-acids -0.1 +0.0 -0.6 +0.6 +0.3
phage Bas38 +0.2 -0.1 -0.6 +0.3 +0.6
carbon source Casamino-acids -0.2 +0.1 -0.3 +0.6 +0.4
carbon source Sodium-DL-Lactate -0.1 +0.0 -0.1 +0.2 +0.7
phage Bas55 +0.5 +0.2 -0.2 -0.1 +0.4
carbon source D-Glucose +0.3 +0.0 -0.3 +0.4 +0.4
carbon source L-Arabinose +0.1 -0.3 +0.1 +0.7 +0.6
carbon source L-Arabinose +0.2 -0.1 +0.0 +0.6 +0.5
carbon source Sodium-DL-Lactate +0.1 +0.1 -0.1 +0.9 +0.8
phage Bas48 +1.9 +1.8 -0.4 -0.9 -0.7
phage Bas55 +0.5 +0.4 -0.0 +0.5 +0.5
phage Bas48 +2.1 +1.8 -0.3 +0.2 +0.0
phage Phi92 -0.4 -0.2 +6.8 +7.5 +7.1
phage Phi92 -0.1 -0.4 +7.0 +7.8 +7.3
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