Fitness for 5 genes in Escherichia coli ECOR38

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500 ntsslE and pppA are separated by 129 nucleotidespppA and gspS2 are separated by 65 nucleotidesgspS2 and gspC are separated by 134 nucleotidesgspC and gspD are separated by 29 nucleotides HEPCGN_18030: sslE - lipoprotein metalloprotease SslE, at 2,351,942 to 2,356,498 sslE HEPCGN_18035: pppA - prepilin peptidase PppA, at 2,356,628 to 2,357,437 pppA HEPCGN_18040: gspS2 - Pilotin AspS 2, at 2,357,503 to 2,357,913 gspS2 HEPCGN_18045: gspC - type II secretion system protein GspC, at 2,358,048 to 2,358,890 gspC HEPCGN_18050: gspD - general secretion pathway protein D, at 2,358,920 to 2,360,980 gspD
Group Condition HEPCGN_18030 HEPCGN_18035 HEPCGN_18040 HEPCGN_18045 HEPCGN_18050
sslE pppA gspS2 gspC gspD
phage Phi92 -0.0 -0.3 -0.4 -0.8 -0.1
carbon source D-Glucose -0.1 -0.4 -0.3 -0.3 -0.1
carbon source L-Arabinose -0.2 -0.3 -0.3 -0.0 -0.1
carbon source Sodium-DL-Lactate +0.0 -0.2 -0.4 -0.1 +0.0
carbon source Casamino-acids -0.0 -0.4 -0.0 -0.2 -0.0
no phage control Control_ECOR38 -0.1 -0.4 +0.1 -0.1 -0.1
carbon source L-Arabinose -0.0 -0.2 -0.1 -0.3 +0.1
phage Bas51 +0.0 -0.2 -0.1 +0.1 -0.0
phage Bas38 +0.0 -0.2 +0.2 -0.1 -0.0
carbon source Casamino-acids +0.0 -0.2 +0.2 +0.0 +0.0
phage Bas39 +0.1 +0.1 -0.1 -0.1 +0.1
phage K20 +0.1 -0.0 -0.2 +0.1 +0.0
phage TP7 +0.1 +0.3 -0.6 +0.1 +0.2
phage K20 +0.0 +0.1 -0.2 +0.1 +0.1
phage Bas19 +0.1 +0.0 +0.2 -0.1 +0.0
phage Bas39 -0.0 -0.2 +0.2 +0.2 +0.0
carbon source Sodium-DL-Lactate +0.1 +0.1 +0.1 -0.0 -0.0
phage Bas38 -0.0 +0.1 +0.1 +0.1 +0.0
phage RB68 +0.1 -0.1 +0.3 -0.0 +0.1
phage Phi92 -0.1 +0.2 -0.0 +0.4 -0.1
no phage control Control_ECOR38 -0.0 +0.0 +0.5 -0.1 +0.0
phage Bas19 +0.1 +0.2 +0.1 +0.1 +0.0
phage TP7 +0.0 +0.0 +0.3 +0.2 +0.1
phage RB23 +0.1 +0.3 -0.0 +0.3 +0.0
phage RB23 +0.1 -0.0 +0.3 +0.5 +0.1
phage Bas55 +0.3 +0.5 +0.4 +0.4 +0.4
phage Bas55 +0.5 +0.3 +0.7 +0.9 +0.3
phage Bas48 +1.9 +1.8 +2.0 +1.9 +2.0
phage Bas48 +2.1 +2.1 +2.2 +2.1 +2.1
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